Detail



ID : Ahg901330

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|901330|Al_scaffold_0004_1980
Sequence
ATGGAGCCTT TCAGTGCTGC TCAGAACAAA GAGGACAAGG ACACTAATGT AGAATCTCCT AGTAGTCCGC GTCATCGGGA GATTCTTGCT AGATGGGATC CGGCTGATGC AAAGAGGCCA GACATTGGTG AAGCTCCAGT ATTCCACCCT ACATCAGAGG AGTTTGAAGA TACACTTGCT TACATAGAAA AGATACGTCC CTTAGCTGAA TCATTTGGTA TTTGTCGAAT CGTGCCACCA TCGAATTGGT CTCCTCCTTG TCGGCTTAAA GAGAAAAGTA TATGGAAGGA TACAAAGTTC CCAACCCGTA TTCAGATTGT TGACCTGCTA CAGAACAGAG AGCCCATGAA GAAGAAGAAG AAACCTAAGG GAAGGAAACG GAAACGTGGA AGAAACTCAA GAACCGTCGC CTCCAAGAAA CGATATGGCT CTGTATCTCG TTCTGTTTCC TCACCCAAGA CGACCGAAGA AGAGACATTT GGTTTCAACT CTGGTTCAGA TTTCACTCTT GAGGACTTTG AGAAATACGC TCGATACTTC AAAGACTATT ACTTTGGAAG AAAAGACAAT GCTGGAGATA CAGAATGGAC TCCAACTGTT GAGGAGATCG AAGGAGAGTA CTGGAGGATC ATTGAGCAAC CAACAGATGA AGTCGAGGTA TCTTATGGCG CTGATTTGGA GAACAGAGTA CTTGGAAGTG GATTTTACAA GAGAGGGGAC ATGAAAACCG GAAGAAGCGA TATGGATCCA TACATAGCTT CAGGTTGGAA CTTGAACAAC CTACCGAGGC TCCCTGGCTC GTTACTGTCA TTCGAGGATT CTCATATTTC TGGTGTTCTC GTGCCATGGT TGTACATTGG CATGTGCTTT TCAACGTTTT GTTGGCATGT CGAGGACAAT CATCTATACT CACTGAACTA TCATCACTTT GGCGAGCCAA AAGTATGGTA CGGAGTTCCC GGAAGCCATG CAACTGGGCT AGAGAAGGCG ATGAGAAAAC ATCTACCAGA TTTGTTCGAT GAACAACCTG ATCTACTTCA TGAACTAGTT ACTCAGTTTT CTCCAAGCAT TTTGAAAGAT GAGGGAGTCC CGGTTTATCG TGCAGTTCAG AATGCAGGGG AGTATGTTCT AACATTCCCT AGAGCATATC ATTCGGGATT CAACAGCGGA TTCAACTGTG CAGAAGCGGT GAATGTGGCT CCTGTTGATT GGCTAGCTCA TGGTCAAAAT GCTGTGGAAA TATATAGCCA AGAGAACCGG AAAGCTTCTT TGTCTCATGA CAAACTTCTC CTCGGAGCAG CTTATGAAGC TGTTAAGTCC CTCTCAGCTT CTGGGGAAGA TAATACAAAA AGGTTCAGCT GGAAGAGTTT CTGTGGGAAG GATGGTATTC TTACTAAGGC AATCGAGGCG CGGTTACGGA TAGAAGAAAG AAGAATTGAG GCCCTTGGAA ATGGTTTCAG CTTGAGAAAG ATGGAAAAGG ACTTTGATTC AAAAGGTGAA ATGGAATGCA TCTCTTGCTT TAGTGACTTG CATCTCTCTG CTACTGGCTG CAACAACTGC TCATCTTTCG AAGAATATGG TTGCACGAAA CACGATATAT GTTCATGTGA AGGGAACGAC CGGTTCATCT ATCTTCGTTA CACCATAGAT GAGTTAAGCT CGTTGATAAG AGCATTGGAA GGTGAATCAG ATGATTTAAA AACTTGGGCT TCCAAAGTCG TTAAGGAAAA GCAGTTACAT AAACAATCTT TTGATCTGAA TCTTGACTTG GTATCGGATG GTGAGTGTAA TACTGCTTCT GAGATATGTG ATGATGCATC CATTATGGAA TTTGCTGCTT ATGTCGTCGA ACCTATAAAT CTTGGGTTCT TGGTCGTCGG AAAGCTTTGG TGTAACAAGG ATGCTATATT TCCAAGAGGG TTTAAGAGTC GGGTTAAATT TTATAACATG CAAGATCCAA TGAGAATGAG CTATTACGTC TCTGAGATTT TAGATGCCGG ACTTATGGGT CCACTCTTCA GGGTTACTTT GGAAGAATCT CAAGACGAGA GCTTCTCTTA TGTGTCACCT CAGAAATGCT GGGAAATGGT GTTGCTTAGA GTTAAGGAAG AGATGATAAA ACGCAGCAGC CAAGAACAAG ATGTCCATAT GTTGGAAACC ATTGACGGGT TAAAAATGTT CGGTTTTCGC TCTCCGTTTA TAGTTCAGGC CACTGAGGCT CTTGACCCGA ACCATCACCT AGTGCAGTAT TGGAACCATA AGAATGAGAC GGCTTGCTCC ATGTCAAATT CTTCCCTGAG CTTAACCAAA ACAAAACTTT TTGGGGTTGA TTTGAATTGA 
Length2340
Protein Sequence
Protein Residue
Map Locationscaffold_4: 15717992.. 15721529
Download Sequence
A.thaliana
AGI-codeAT2G34880.1
DescriptionTranscription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
TAIR curator summary
Alias[JMJ15][MEE27][PKDM7C][Jumonji domain-containing protein 15][maternal effect embryo arrest 27]
Gene coexpression
MR
MR Locus Description
17.2047 Ahg481561
18 Ahg899946
24.454 Ahg491636 Wall-associated kinase family protein
28.5657 Ahg898863
32.1714 Ahg912287
32.7261 Ahg911863
42.2847 Ahg359781
42.72 Ahg923796
43.2435 Ahg489354 Protein phosphatase 2C family protein
58.3352 Ahg481983 ATP-dependent caseinolytic (Clp) protease/crotonase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression