Detail



ID : Ahg901982

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|901982|Al_scaffold_0004_2632
Sequence
ATGGCTTACA TTGTTTTTGC GTTTAAGGCT TTGTGTTTGT CTCTCTTGTT CATTGTTGTT GCAAGTCGTT CCACCGTCAG ACCAAAAGTT TTCAACGTCC AACGCCATGG TTCTAAACCG GACGGAAAAA CTGATAACGC CAATGCATTC ACAAGTGTAT GGAGCCGTGC ATGCAGAAGG AAAAGTGGAA GTAGTAAAAT ATATGTACCA AAAGGAACAT TCTACCTCGG TGGTGTAGAG TTCGTGGGTC CATGCAAAAA TCCTATTGAA TTTATTATCG ATGGAACTTT ATTGGCTCCT GCAAATCCTA GCGACATTAA GCAAGACACA TGGATCAACT TTAGGTACAT CAACGATCTC TCTATCTCCG GTTCTGGTAC ACTTGACGGT CAAGGGAAAC AGTCTTGGCC ACTCAATGAC TGCCACAAAA ACCCCAATTG TCCTAAACTA GCTATGGTAA CATTTCCTCC CGGCGATAGT CCCAACACCG ACGGTATCAA GATGGGTTCA TGTAGTAACA TTCACATCTC CAACACAAAC ATTGGTACTG GAGACGATTG TATCGCCATT CTCTCTGGAA CCACTAACCT CGATATCTCT AATGTTAAGT GTGGTCCTGG ACATGGGATC AGTGTCGGAA GCTTAGGAAA GAACAAAGAC GAGAAAGACG TGAAAGACTT AACAGTAAGA GACGTTTTTT TTAACGGTAC TAGCGATGGT ATTCGGATCA AGACTTGGGA ATCTTCAGCC TCAAAAATCC TCGTTTCGAA CTTCGTATAC GAGAATATTC AGATGATTGA CGTTGGAAAA CCAATCAACA TCGATCAAAA ATATTGTCCT CACCCACCTT GTGAACATGA GCAAAAGGGA GAGTCTCACG TTCAAATCCA AGACCTTAAG TTAAAGAACA TATATGGAAC GTCGAAGAAC AAAGTGGCAA TGAATCTGCA ATGTAGCAAA AGTTTTCCGT GCAAGAATGT GGAACTGATT GACATTAACA TAAAGCATAA TGGACTCGAA GGTGGTTCTT CCACTGCGGT GTGCGAGAAT GTTGACGGTT CTGTACGCGG TAAAATGGTT CCTCAACATT GTCTAAATTG A 
Length1101
Protein Sequence
Protein Residue
Map Locationscaffold_4: 18653008.. 18654824
Download Sequence
A.thaliana
AGI-codeAT2G40310.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg471933
4 Ahg910746
10.4881 Ahg472315 F-box family protein
10.6771 Ahg472768 F-box associated ubiquitination effector family protein
15.1658 Ahg891423
18.3303 Ahg321717 SGNH hydrolase-type esterase superfamily protein
27.3313 Ahg926289
28.2489 Ahg944709
31.1288 Ahg318329 Regulator of Vps4 activity in the MVB pathway protein
35.0999 Ahg488415
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression