Detail



ID : Ahg318329

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|318329|fgenesh1_pm.C_scaffold_3001345
Sequence
ATGTGTGCCA AGAAAACAAA ATCAAAGTTT GGGTGCTTTA GTAACGTCTT TGGTGATCGA TCTCGTTCTT CAAGATGGCG AAAAGCTTCA AAGTGCAAAC TCCATATCCA GAATCTGCTA TGTTCTATTA AATTACATCG GAGTCGAAGA GAGTGTATGG TCAGACAATC CCGGTCCGAT ATTACTCAGC TCCTCTCTAA TGGCCGCTTT TCAGAAGCTC TTCCAAAGGT ATCTGAGATT AATCTCAATC AGCTTGCGAA GCAATTCTAT GAAGATGAGA GAAGGTTATC GGCATACGAT CAGGTCGAGC TCTTCTGCAC ATCCATCTTG CAGAATATAT CTTCTTTGAA ACATGAAAGC GATGTTAATT TGTTACTGGA AGAAACTAAA GAAGCAATGG CCGGAATGAT ATTTGCTGCA TCAAGAATTG GCGAGCTTGA GGATCTTCAA CACATAAGGA GCTTGTTCGT CCAAAGATTT GGGCTTCAGT TTGACAAAGA CTGTGTAAAT TTGCGCCAAG GAAACGTCGT GGGTTCTGAG ATAGTCAAGA TTCTAGACAC AAGTGTGCGG AAAGATGAAA TTACACATAT TGTAATGGAA CTTTCTCAAA AGTACCAAAC CAACATCGCT ACTTCTGCGG ATTCGATAAG TAAAGATTCA GCTTCAAGTG ACGATCTTGG CATTTCCGAT CCTGATGTGA TGAAGGTAGA GAAAATGAAA AGGGTTAGGA GAAAGGAAGT TGTGAAGGAG AATTCTAAGT TTATGCATCC AAATCTTGGA GAGTTTCAAG GAAGAGATCG ATCATTCATG AGATAA 
Length816
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6156737.. 6157837
Download Sequence
A.thaliana
AGI-codeAT3G15490.1
DescriptionRegulator of Vps4 activity in the MVB pathway protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.69042 Ahg913114 PQ-loop repeat family protein / transmembrane family protein
5.47723 Ahg896600
7.74597 Ahg920601
10.6771 Ahg936937 Family of unknown function (DUF572)
14.2829 Ahg915870 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
16.6132 Ahg481174 SNF1-related protein kinase 2.9
18.3303 Virus0498
18.4391 Ahg937632
20 Ahg949344
20.347 Ahg497427 CLAVATA3/ESR-RELATED 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression