Detail



ID : Ahg902192

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|902192|Al_scaffold_0004_2842
Sequence
ATGAAGCCTA TCGTGTGTGA CAAGGGACAT GGAATGGTCC AGGCGGGATT TGCAGGAGAC GAAGCACCAA AGGTTGTGTT TCCATGCGTC GTGGGTCGTC CAAAAGATGG AATGAACCCG AACGATTCTT ATGTGGGAAA CGAAGCTCAA GCCAAGAGAG ATATTCTTAC ATACCCAATG GAGCATGGTA TCGTTAAAAA TTGGGATGAC ATGGAGAAGA TTTGGTACCA TACTTTCTAC AACGAGCTAC GTGTGGATCC TAAAGAACAC CCTGTGCTTC TCACTGAAGC TCCTTTTAAC CCTAAAGCCA ATCGTGAGAA AATGACTCAG ATCATGTTTG AGAGCTTTGA TGTTCCTGCC ATGTACGTGT CCATTCAATC TGTTCTTTAT CTCTATTCCA GTGGTCGTAC CACAGGTGTT GTGTTGGATT TAGGAGACAG AGTGAGCCAC ACAGTTCCAG TATACGAAGG TTACGCACTC CCACACGGTA TACTGCGTCT GGACCTAGGA GGCCGTGACC TAACTGACTA CCTCATAGAA ATCATGGCCG AACGTGGCTA CACATACACC TCATCCGCCG AGCGTGAGAT AGTCCGAGAC ATCAAAGAGA AGCTTTGTTA CATAGCTCTC GACTACGAGC AAGAAATGGA GAAGGCAACA AAGGGCTGGG CAATCGATAA AACCTACGAG CTTCCCGATG GTCAAGTGAT CACGCTAGAA GCCGAGAGAT TGATCATGTG CCCTGAGGTT CTTTTCCAGC CGTCTTTGCT AGGAAAGGAA TCTTGTGGTA TTCACGAGGC TACTCGCAAT TCGATCTTGA AGTGTCCAGT TGATACGAGG AGGGATCTGT TTGGTAACAT TTTGATGACT GGTGGCTCAA CGATGTTCCA TGGGATTAAA GAAAGGATGA CCAAAGAGAT CACTGCACTT GTACCGTCAA GTATGAAAGT TAAAATTGAT GTTCCTCTGG AGAGTAAGTG TAGTGTTTGG AGTGGAGGCT CCGTTTTGGC TTCTCTAAGC ACCTTTCATC AGATGTGGAT AACTAAGGAT GAATATGAAG AACATGGAGC GGCGATTGTT CACAGTAAAT GCTTCTAA 
Length1098
Protein Sequence
Protein Residue
Map Locationscaffold_4: 19546865.. 19553676
Download Sequence
A.thaliana
AGI-codeAT2G42090.1
Descriptionactin 9
TAIR curator summaryactin related gene or pseudogene, based on sequence divergence and lack of expression
Alias[ACT9][actin 9]
Gene coexpression
MR
MR Locus Description
18.9737 Ahg903774 Protein of unknown function (DUF674)
32.2335 Ahg315689
37.8946 Ahg475481 DNA binding;sequence-specific DNA binding transcription factors
39.4968 Ahg922170 root hair specific 4
40.5709 Ahg490208 transposable element gene
49.96 Ahg487203 phenyl alanine ammonia-lyase 3
51.614 Ahg496970
52.6498 Ahg919507 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
55.6776 Ahg481942 GDSL-like Lipase/Acylhydrolase family protein
56.9122 Ahg905868 Ubiquitin-specific protease family C19-related protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression