Detail



ID : Ahg902613

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|902613|Al_scaffold_0004_3263
Sequence
ATATGTGAAT GCATGATTGC ACATGGTGCT GCTCACTTTT TGAAAGGGAG GCTGTTTGAT CAGGGTGATG CGTATACGGT ACATGTGTGT GAAGTCTGCG GGCTCATCAC CATTGCAAAT ATGAAGAAGA ATTCTTTTGA ATGCAGAGGT GGCAAGAACA GAATAGATAT AAATATTGTC AGCATTCCAT ATGCTTGCAA ATTGCTCTTT CAAGAGCTTA TCTTATGGCA ATGGCAATTG CACCACGGAT GCTTACTA 
Length258
Protein Sequence
Protein Residue
Map Locationscaffold_4: 21122134.. 21122498
Download Sequence
A.thaliana
AGI-codeAT4G21710.1
DescriptionDNA-directed RNA polymerase family protein
TAIR curator summaryEncodes the unique second-largest subunit of DNA-dependent RNA polymerase II; the ortholog of budding yeast RPB2 and a homolog of the E. coli RNA polymerase beta subunit.
Alias[EMB1989][NRPB2][RPB2][EMBRYO DEFECTIVE 1989]
Gene coexpression
MR
MR Locus Description
8.3666 Virus3316
9.48683 Virus0906
10 Virus1052
11.8322 Ahg929589 phragmoplast orienting kinesin 1
14.1421 Virus1078
17.4929 Ahg928829
19.0788 Ahg946477
24.2693 Virus1059
25.9808 Virus1179
27.8388 Ahg926593 Kunitz family trypsin and protease inhibitor protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression