Detail



ID : Ahg903909

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|903909|Al_scaffold_0003_1037
Sequence
ATGACAACTG GGTTGCACGA ATTCAATCTG GCTTCAAGAA GAGCCGAAGA AGCAGCGGCG AGGAGGTTTC AAGCCGTGCA ATGGCTTAAA TCTGTAGTGG GTCAACTGGG CATACCGAAT CAGCCATCGG AGAAGGAGTT CATTTCTTGC TTGAGAAATG GTATGATTCT TTGTAATGCA ATCAACAAGA TCCACCCAGG AGCCGTTTCC AAGGTTGTGG AGAACTACTC GTATATGAAC GGAGAGTATC AACTTCCACC GGCTTATCAA TATTTCGAGA ATGTTCGGAA TTTTCTTGTG GCTTTAGAAA CATTGAGGCT TCCTGGATTT GAAGCTTCTG ATCTTGAAAA GGATAATCTA GAGTCTGGAT CAGTGACCAA GGTTGTGGAT TGCATTTTAG GACTTAAGGC TTACCATGAG TGCAAGATAA CGAGCAATGG TAATGGGTTA TACAAGCACG TCAAAACGCC GACATTTCAG CTCTCTGCGA CTAAGATTCA GCCTCTAAGT GCTTCCAAAA CGTCTAGGCA TTTGGATATG TCCTCAGTCC GTGATATAAA CGATTGCACT GATGGTGAAT CTGATAAACT CAAAGAGATA GCCAAGTTGT TTGCCGATCA TATTTTCAAT TCCAAGGAAA ATATTGATGA GAATCTTATT TCATTAGAGA ATGGCACTGG GAATCCTAGA GCAAACTTCG AGAAAATCAT CTCAAGATTC CCAGAGCTTC AGTCAGTATT CAAGAATTTA CTTAGCGAAG GTACTTTGAG TCCACCAGAA TTAAAATCCA TGCCTCTGGA GGAGTTACTT GTCCATGAAG AAGACCAAGT TCTCAAGACC TTGTTTATAA AAACGAAGCA GGATTTTAAG GAATTTCAGG TTCATTTGCA AAGAGATTTG ATGGAGCTCG GGAATCAGAT GCAAGAGATG TCATCAGCAG CTCAAGGATA TTACAAAGTG GTGGAAGAGA ACCGAAAACT ATATAACATG GTGCAAGATC TTAAAGGAAA TATAAGAGTG TACTGCAGAG TTAGACCGAT CTTCAATAGT GAAATGAACG GAGTAATAGA TTATATAGGA AAAGATGGCT CTTTATTTGT TTTGGATCCA TCGAAGCCTT ATAAAGATGC AAGAAAAACT TTTCAATTTA ATCAAGTATT TGGTCCAACA GCAAGTCAAG ATGATGTATT CAGAGAAACG CAACCATTAA TCAGATCAGT GATGGATGGT TACAATGTCT GCATTTTCGC TTATGGTCAA ACTGGATCAG GGAAGACATA CACAATGAGT GGTCCTCCAG GTAGATCAGC TACTGAAATG GGAATAAACT ATCTTGCTCT CAGTGATCTC TTTCTGATAT ATATTCGAAC TTGTTCCAGC GAGGATGATG GCTTGAGTCT TCCAGATGCT ACAATGCATT CTGTGAATTC CACCAAGGAT GTCCTTCAGC TGATGGAGGC TGGAGAAGTG AATCGTGCAG TCAGTTCCAC ATCCATGAAC AATCGAAGTA GTCGGTCTCA CAGTATTTTT ATGGTGCACG TACGTGGGAA AGACACATCT GGGGGAACCC TCCGAAGTTG CTTGCATCTG GTGGATCTTG CAGGGAGCGA GAGAGTAGAT AAATCAGAGG TTACTGGAGA CAGACTTAAG GAAGCACAGT ATATCAACAA ATCTCTTTCT TGTCTCGGAG ATGTGATTTC TGCATTGGCT CAGAAGAATT CTCACATCCC CTACCGAAAC AGCAAGTTGA CTCTTCTACT TCAAGACTCA TTAGGAGGAC AAGCCAAAAC ATTAATGTTT GCTCATTTGA GTCCTGAGGA AGACTCCTTT GGGGAAACAA TCAGTACTTT GAAATTCGCA CAAAGAGTTT CAACAGTCGA ACTTGGAGCT GCTCGTGCAC ACAAAGAGAC TAGAGAGGTT ATGCATCTCA AGGAGCAGAT TGAAAACCTC AAGAAGGCTT TGGGTACCGA AGAATATAAT AATGTTTTCA ACAGTGGAGC AAAGGAGATA AAATCTCCTT ACAGCAGGCC ATTTGCAACA ACAGAGAGAA CTCCTCCACG TCTCAGAAGA TTAAGCATCG AAAACTGTAG CAACACAAAG GCAAACCTTG AAGACAGGAA AGGTGTTAAA TCACCTTTAG CCTCCCGTCG TGCACAAAGA TTGAGTTTGG AGGGTCCAAA GTCCTGTAAA AACGAAGAAA ACAGTAAAGG AGATCCCACC ATGGAAGTGC ACCAGCTCAA GAATCCACGG AGTCCTTTAA GCTCTTATCA AAACCGAGCA GTGAAAGTAG ATGGCAGAAC AAGCATTCCT CAACTTCAGC TATTGCAAAC ACCAGTTAAA GGTGCTTCCA GAAACGACAT ACAAATGATT TCTGTGGATT CTAGGACAAA TGGAAAAGGT TCACAAATAC GGAAGTCCCT GAGGACAATT GGAAAGCTGA TCAATGGTTC AGAGAAGAGG AAAGATAACA TTCCTGCAGA TCCACGGTCA CCACTTGGAG TTGCAAATAA TTTCAGTCAT ATAAAGTCCC CGGACACAAG CAACGCTAAG ACTATGCGAC GGCAGTCACT CACAGGTGTA ATGCCACCAG GGCAAGAAAG ATCACGTCGA TCCTCAATAG GAGGAAAACC AATTGAGAAT GGTAAGAAAG ATCTTACCAA AAGTTCACCT GTCTCTTTAC GCCTTTTCAT CTGA 
Length2694
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3856017.. 3860931
Download Sequence
A.thaliana
AGI-codeAT3G10310.1
DescriptionP-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.16228 Ahg324343
7 Ahg485550 Transducin/WD40 repeat-like superfamily protein
8.12404 Ahg493738 ARM repeat superfamily protein
20.5913 Ahg906268 D-3-phosphoglycerate dehydrogenase
23.2164 Ahg479171 Nucleic acid-binding proteins superfamily
26.7021 Ahg485245 single-stranded DNA endonuclease family protein
27.2029 Ahg930410 phragmoplast-associated kinesin-related protein, putative
29.4958 Ahg494222 Pectin lyase-like superfamily protein
39.1152 Ahg475591 cytochrome P450, family 96, subfamily A, polypeptide 3
39.1408 Ahg945124 glycine-rich protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression