| Annotation |
|---|
| Description | jgi|Araly1|904083|Al_scaffold_0003_1211 |
| Sequence |
ATGGCGGCTC CGGAGGATGA ATCTTCCGCT CAGTCTCAAT CTTCCTCTGC CACAGCGGCT CCTACGCCTC CTCCGTCCTC TTCCCCTTCC TCTGCTGGGG ATCATTACCT AGCTAAGTGC ATCCTCCGCC CCAGCGTCGT TCTCCAGGTT GCTTATGGCT ACTTCCGCTC CCTTTCCTCC CGCGACATAG TTTTCGGCAA GGAGACCTGC ATAGAATTGG TGGTTATTGG TGAAGACGGG ATTGTTGAAT CGGTGTGTGA ACAGTATGTA TTTGGAACAA TTAAGGATTT GGCTGTCATA CCTCAGAGTA GCAAGCTATA TTCGAATAGT TTGCAGATGG GAAAAGACCT TCTGGCTGTT CTTTCTGATT CTGGAAACCT CTCATTCCTC TCATTTAGCA ATGAAATGCA CAGGTTCTCG CCCATACAAC ATGTTCAACT TTCTACTCCA GGTAACTCAC GGATTCAACT CGGAAGAATG CTCACAATAG ATTCCAGTGG TCTCTTTCTT GCTGTCAGTG CGTATCATGA TCGTTTTGCT CTGTTTTCCC TCTCAACATC GTCTATGGGT GATATTATTC ATGAGAGGAT TTCTTATCCT TCTGAAGACG GAGGGAATGG TAGCTCTGTA CAAGCAATAT CTGGTACTAT TTGGAGCATG TGTTTCATTT CTAAAGATTT TAATGATTCC GAATCCAAGG AGTATGCTCC TGTTCTTGCC ATTGTTATAA ATAGGATTGG GTCTCTCATG AATGAGCTGG CTTTGTTTAG ATGGAATGTC AAAGAGGAAT CCATATGTTT AATATCAGAG TATGTTGAAG CTGGGGCTCT GGCACATAGT ATTGTCGAAG TTCCTTACTC CTCTGGATTT GCCTTTCTGT TTAGGATTGG TGATGCACTC TTAATGGATC TTAGAGATCC TCAAAACCCT TGCTGTCTGT TTAGGACATC CTTAGATCTT GTTCCTGCTT CACTAGTGGA AGAGCATTTT GTCGAAGAGT CGTGTAGAGT ACAAGATGGA GACGATGAGG GTTTTAATGT TGCTGCATGT GCTTTGTTAG AGCTCAGTGA TCATGATCCC ATGTTCATAG ATACTGAAAG TGACATTGGA AAGTTGAGTT CTAAGCATGT CTCTTCATGG ACTGGGGAGC CGGAAAATAA TCATAATCCT CGGATGATTA TATGCTTAGA TGATGGTGAA TTTTACATGT TTGAACTCAT ATATGAAGAT GATGGGGTTA AAGTAAATCT ATCAGAGTGT TTATACAAAG GTTTACCATG CAAGGAAATT TTATGGGTCG AAGGTGGATT CTTGGCTACT TTTGCGGAAA TGGCAGATGG AACGGTTTTC AAATTGGGAA CTGAGAAGCT ACATTGGATG AGTTCCATAC AAAATATTGC TCCAATCTTG GATTTTTCGG TTATGGATGA CCAGAATGAG AAACGAGACC AAATATTTGC TTGCTGTGGT GTAACCCGTG AAGGCTCTCT GAGAATTATT CGTAGTGGCA TTAATGTAGA AAAACTTCTG AAAACCGCGC CTGTTTATCA AGGAATAACT GGTACTTGGA CTCTTAAAAT GAAGCTTACT GATGTATACC ATTCATTTCT TGTTTTGTCA TTTGTTGAGG AGACCAGGGT TTTATCAGTT GGATTAAGTT TTAAAGATGT CACTGATTCA GTAGGTTTCC AGTCTGATGT TTGCACCTTG GCATGTGGGC TTGTTGCTGA TGGTTTGTTG GTTCAGATTC ACCAAGATGC AATAAGGCTG TGCATGCCCA CCATGGATGC TCATTCTGAT GGTATTCCTG GTTCTTCACC ATTTTTCTCG TCGTGGTTTC CAGAAAATGT CAGTATCAGC TTGGGGGCAG TTGGTCAAAA TTTGATAGTT GTCTCTACGT CTAACCCTTG TTTCTTGTCT ATTCTTGGGG TCAAATCAGT ATCATCTCAA TGCTGTGAAA TCTATGAAAT CCAACGAGTA ACATTGCAGT ATGAAGTTTC CTGCATCTCA GTTCCTCAAA AACATATTGG AAAAAAGCGA TCCTGTGCTT CTTCGCCGGA TAATAGTTTC AAAGCTGCGA TTCCTTCTGG TATGGAGCAA GGCTATTCAT TTTTGATTGG CACACATAAG CCTTCTGTTG AAGTCCTGTC CTTCTCAGAA GATGGTGTTG GTGTTCGAGT CCTTGCTTCT GGGTTGGTAT CGCTAACAAA TACAATGGGA GCTGTTATTA GTGGGTGCAT TCCTCAAGAT GTAAGACTCG TGTTAGTTGA TCAACTTTAT GTCCTTTCTG GGTTGAGAAA TGGGATGCTT CTCCGTTTTG AGTGGCCCCT TTTTTCAAAT GCATCCGGGT TGAATTGTCC AGATTATTTT AGTTACTGTA AAGAAGAGAT GGACATTGTT GTGGGCAAAA AAGACAATTT ACCCATCAAC CTTCTATTAA TTGCTACTCG ACGCATTGGC ATCACACCTG TTTTCTTGGT TCCGTTCAGT GATTCACTGG ATTCAGACAT CATAGCTCTT AGTGATAGGC CATGGTTGTT ACAAACAGCT CGACAAAGCC TTTCTTATAC TTCCATCTCA TTCCAACCTT CTACTCATGC AACTCCTGTA TGCTCGTCTG AATGCCCTCA AGGAATTCTT TTTGTTTCAG AGAACTGTTT ACATCTGGTG GAGATGGTGC ACAGCAAACG GCGTAATGCG CAAAAATTTC ACCTTGGAGG CACCCCACGA AAGGTTATCT ACCATAGTGA AAGCAAACTA TTGATTGTGA TGAGAACTGA TCTGTATGAT ACGTGTACGT CTGATATATG CTGTGTGGAC CCGCTCGGTG GGTCAGTGTT ATCATCCTAC AAGCTCAAAC CTGGAGAAAT TGGGAAGTCA ATGGAGCTTG TACGTGTGGG AAATGAGCAT GTCCTTGTGG TTGGGACGAG TTTGTCTTCT GGTCCTGCTA TACTACCCAG TGGTGAAGCT GAAAGTACAA AAGGACGATT AATCATCCTC TGCCTAGAAC ACACTCAAAA CTCGGATAGT GGCTCAATGA CAATTTGCTC AAAGGCTGGT TCGTCTTCCC AACGTACATC ACCTTTTCGT GATGTTGTGG GATACACAAC AGAACAACTG TCAAGCAGTA GTCACTGCAG CAGTCCAGAT GATAATAGCT ATGATGGAAT CAAATTTGAT GAAGCTGAAA CATGGCAGTT AAGATTGGCC TCTGCAACCA CTTGGCCGGG GATGGTACTT GCAATCTGTC CATACCTTGA TCATTACTTC CTGGCGTCTG CTGGCAATGC TTTCTATGTA TGTAGTTTTC CGAACGATAG TCCTGAGAGA ATGAAGAGGT TTGCGGTGGG AAGGACTCGT TTCATGATAA CATCTCTGCG CACATACTTC ACTAGAATTG TAGTTGGGGA TTGCCGTGAT GGTGTTCTAT TTTATTCTTA TGACGAGGAC TCGAAGAAAC TTCACCAAAT ATATTGTGAT CCAGCGCAGA GGTTAGTTGC TGACTGCTTT CTAATGGATG CCAATTCTGT TGCTGTATCT GATCGCAAGG GGAGTATAGC AATCCTGTCT TGCCAAGATC ATTCAGAATT TGGTACGAAG CACTTAGCCT TTTCTCCTCG TGATGATCCA GAATATTCAA GTCCGGAGTC CAACCTGAAT CTAAACTGTG CTTATTACAT GGGTGAGATT GCAATGGCTA TCAAAAAGGG TTGCAACATC TACAAACTTC CAGCTGATGA TGTACTGCAA AGTTATGGTC TTAGTAAAAG TATTGACACA GCTGATGACA CTATCATAGC AGGCACGCTA TTGGGAAGTA TATTTGTGTT TGCTCCTATT TCAAGCGAGG AATATGAGCT CTTAGAAGCT GTCCAAGCAA AGCTCGGGAT CCATCCCCTG ACTGCTCCTG TACTTGGTAA TGATCATAAT GAGTTCCGAG GTCGAGAGAA TCCGTCCCAA GCGACAAAGA TATTGGATGG TGACATGCTT GCTCAGTTCT TGGAGCTTAC AAATAGACAG CAGGAGTCAG TTTTATCGAC ACCTCAGCCA TCACCAAGCA CATCAAAAGC AAGTTCAAAA CAACGTTCTT CCCCGCCTCT CATGCTACAT CAAGTTGTAC AGTTGCTCGA GCGTGTCCAT TACGCTTTGC ACTAG |
| Length | 4155 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 4548774.. 4555763 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G11960.1 |
| Description | Cleavage and polyadenylation specificity factor (CPSF) A subunit protein |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.47214 |
Ahg485153 | Ubiquitin carboxyl-terminal hydrolase-related protein |
| 8 |
Ahg950645 | myosin heavy chain-related |
| 8.3666 |
Ahg496629 | splicing factor, putative |
| 9.48683 |
Ahg488554 | cellulose-synthase like D2 |
| 9.8995 |
Ahg946844 | Topoisomerase II-associated protein PAT1 |
| 24.5561 |
Ahg492913 | VPS54 |
| 28.9828 |
Ahg472374 | Target of Myb protein 1 |
| 33.1361 |
Ahg941039 | |
| 34.8999 |
Ahg492250 | glutaminyl cyclase |
| 35.2846 |
Ahg950719 | exocyst subunit exo70 family protein H7 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|