Detail



ID : Ahg904089

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|904089|Al_scaffold_0003_1217
Sequence
ATGGCAACGT TATCGACTAA TGACAATGAG AGGCGTAACA CCAAACTATC ACCATTCTTA CACTTTAATT TCTTCTTCTT CTTCGTTGTC TTATTAGCTC TGGTTCGTCA TGTGTTCTCG ATCAATACTT TGTCATCTAC AGAAACTCTG ACAATCTCAA GCAACCGAAC CATTGTATCT CCCGGTAACG TCTTCGAGCT TGGTTTCTTC AAAACCACAA CAAGCTCTCG AAATGGTGAT CGTTGGTATC TTGGGATTTG GTACAAGTCA ATCTCTGAGA GAACTTATGT ATGGGTTGCT AACAGAGACA ATCCTCTTTC CAAATCCATC GGAACATTAA AAATCTCTTA CGCTAACATT GTCCTTCTTG ATCATTATGA TACTCCTGTT TGGTCAACGA ATCTGACGAG AATGGTGAAA TCTCCAGTGG TGGCAGAGCT TCTCGATAAC GGCAACTTCG TGCTTAGAGA CTTCAAAAGC AACAATCAAA ATCGATTCTT GTGGCAAAGC TTTGATTATC CGGTTGATAC TTTGCTACCG GAGATGAAAA TTGGTCGGAA TCTCAAAACA GGACACGAGA GTTTCCTCAG TTCTTGGAGA AGCCCTTATG ATCCCTCAAG CGGAGGCTTC TCTTTCAAAC TCGAAACTCA AGGGCTACCT GAGTTATATC TTTACAAGAA AGAGTTTCTA TTGTACCGAT CCGGTCCGTG GAATGGAGTC GGGTTTAGTG GCATACCGAC GATGCAAAAC TGGAGCTACT TTGACGTTGT TAACAACTTC ATAGAGAACA GAGAGGAAGT TGCTTACAGT TTCAACGTCA CCGACCATAG CATGCACTAT TTGAGATTTA CACTGACTTC CGAAGGATTA TTACAGATAT TCAGATGGGT TACGATATCA TCGGAATGGA ACTTGTTTGG GGTTTTACCG ACCGAGAATT GTGATTTGTA CCAAATCTGT GGTCGTGACA GTTATTGTGA CATGAAAACG TCACCGACGT GTAATTGTAT CAAAGGCTTT GTTCCAAAGA ATGTGACGGC TTGGGCTTTG GGAGATACGT TCCATGGATG TGTGAGGAAG TCACGGTTGA ACTGCCACGG AGATGTTTTT TTTCTGATGA AGAGGATGAA GCTGCCGGAT ACAAGTACAA CAGTTGTGGA CAAGAGAATT GGGTTGAATG AATGTAAGGA GAGGTGTTCT AAGGATTGTA ACTGTACCGG GTTTGCGAAT AAGGATATCC GAAATGGTGG GTCGGGTTGT GTTATTTGGA CCAGAGAGCT CAGAGATATG AGGAATTACG TCGCCGGAGG TCAAGATCTT TATGTCAGAT AA 
Length1332
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4576511.. 4578027
Download Sequence
A.thaliana
AGI-codeAT3G12000.1
DescriptionS-locus related protein SLR1, putative (S1)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Ahg938540 Pre-mRNA-splicing factor 3
5.09902 Ahg921413 Domain of unknown function DUF220
5.2915 Ahg478323 Calcineurin-like metallo-phosphoesterase superfamily protein
10.583 Ahg922940
10.7703 Ahg950657
10.9545 Ahg892951 MATE efflux family protein
12 Ahg891116 Fcf2 pre-rRNA processing protein
12.1244 Ahg930710
20.7846 Ahg924748
20.7846 Ahg481137 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression