| Annotation |
|---|
| Description | jgi|Araly1|904095|Al_scaffold_0003_1223 |
| Sequence |
ATGGCGTCGG ACACCGTTAA GCATATGCCT ATTCACGGCG TCTCCGCCTT CTCCTCCGTC ACCGTCGAAA TCAAAAACTT TTTCTCCGCC GTGAAACCAA GAAAAACCTC AACTTTCGTC TACGCTTTCG TCGTAACTTT CGTTGCCTTG ACTGTTTTCT TAGCCTTTAG TCCTTCTCCC ATCACAGTCG CAATCGCTCC TTCCATTTCT TCCTATATTC TCCCTAATAT CACTGTCTCC AATTCACCTA ACTCTCCAGC GTCGACCCTC GATTCCAATT TCACCACATT GCCGACACCG GCGCCGGAAA ATCTCACGGC AGTTACTAAA AACGTAACCT TTGAGTCCCC CATCGCAAAT GGGACAACAG ACCCGACTGC TACAGACAAC ACTTTTCAGT TCAAGACCGA TCATGCAAAG GAAAACATAT CGTGTCCTGA CAACAAGACT GATGTTACTG CTCGAGATTT GGACAAACAT GGAGCAAGGA AAGCACCTCT GTCGGAGGTT CTAGCCGTCA ATTCCTCTGC TTCTCAGATG AGAAAACAGA GAAGGAAGTC GTCGCTGAGA AAAGTGATCG AGTCTCTGAA GAGTTGCGAG TTTTTCGAGG GAGATTGGGT CAAAGACGAT TCGTATCCGC TCTACAAACC CGGGTCGTGT AATCTGATCG ATGAACAGTT TAATTGTATC TCTAACGGAA GACCTGACGT GGATTTCCAG AAATTGAAAT GGAAACCAAA GAAATGCTCT TTACCAAGGT TAAATGGAGG TAAATTGCTG GAGATGATTA GAGGAAAAAG GCTAGTGTTT GTTGGAGATT CGCTGAATAG AAACATGTGG GAGTCTTTGG TTTGCATTCT TAAAGGATCA GTGAAAGATG AGAGTCAAGT CTTTGAGGCT CATGGAAGGC ATCAATTCCG TTGGGAGGCT GAGTACTCCT TTGTCTTCAA AGATTATAAT TGCACTGTGG AGTTCTTTGC ATTGCCTTTC TTGGTTCAAG AATGGGAAGT TACAGAGAAT AACGGGACGA AGAAGGAGAC TTTGCGGTTA GATTTGGTCG GGAAGTCATC GGAGCAGTAC AAAGGAGCGG ATATTCTTGT ATTCAATACC GGACATTGGT GGACTCATGA GAAAACTTCC AAAGGGGAGG ATTATTATCA AGAAGGGAGC AATGTTCACC CGAAACTCGA TGTGGATGAA GCTTTTCGAA AAGCATTGAC GACTTGGGGT CGATGGGTTG ATAAGAATGT GAATCCAAAG AAATCCCTTG TTTTTTTCCG TGGTTATTCC CCGTCACATT TCAGCGGCGG GCAATGGAAT GCGGGAGGAG CATGCGATGA TGAAACAGAA CCGATCAAGA ACGAGACTTA CCTAACTCCT TACATGTTGA AGATGGAGAT ACTTGAAAGA GTTCTCAGTG GAATGAAAAC GCCTGTCACG TATCTCAACA TCACGAGGTT AACTGATTAC AGGAAGGACG CTCATCCGTC GATATACCGG AAACAAAAAC TATCCGCAGA AGAAAGTAAA TCACCATTGT TGTACCAAGA CTGTAGCCAC TGGTGCCTCC CTGGGGTGCC TGATTCTTGG AACGAAATTC TCTATGCCGA GATACTCGTA AAACTTGACC AGCTTGGTGG CAGAAGACGG CGGAAACCCC TAAAAGATCA TAGGAGTTGA |
| Length | 1680 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 4602198.. 4604236 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G12060.1 |
| Description | Plant protein of unknown function (DUF828) |
| TAIR curator summary | Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). |
| Alias | [TBL1][TRICHOME BIREFRINGENCE-LIKE 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 34.641 |
Ahg479830 | HR-like lesion-inducing protein-related |
| 55.6866 |
Ahg473475 | Galactosyltransferase family protein |
| 57.28 |
Ahg924959 | Translation elongation factor EF1A/initiation factor IF2gamma family protein |
| 68.4982 |
Ahg924126 | cytochrome P450, family 708, subfamily A, polypeptide 1 |
| 74.8999 |
Ahg947132 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| 75.8551 |
Ahg484574 | ribosomal protein L12-B |
| 83.2346 |
Ahg494685 | Plant thionin family protein |
| 95.289 |
Ahg908168 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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