Detail



ID : Ahg904167

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|904167|Al_scaffold_0003_1295
Sequence
ATGTCGGAAG CATCTTGTCT TGCTTCTCCT TTTCTCTACA CCAATTGTGG AATCCATTCT GATTCTTTCT ACGCTTCGCT TATTGATAGT TCCACTCATA AATCTCAGTT GAGGCAAATC CACGCACGTT TATTGGTTCT GGGTTTGCAG TTCAGTGGTT TCTTGATCAC CAAGCTCATT CACGCTAGCT CTTCCTTTGG TGACATTACT TTTGCACGCC AGGTGTTCGA CGATTTACCT CGTCCTCAAG TATTCCCCTG GAATGCTATT ATCAGGGGTT ATTCGAGAAA CAATCACTTC CAAGATGCTC TCCTCATGTA TTCCAAGATG CAACTCGCTC GTGTTTCTCC TGATTCTTTC ACTTTCCCTC ATCTTCTTAA AGCTTGCGGC GGTTTGTCTC ACCTTCAGAT GGGTAGATTT GTTCATGCTC AGGTGTTCAG GCTTGGATTT GAAGCGGATG TGTTTGTTCA GAATGGTCTC ATTGCCTTGT ATGCGAAATG TAGGCGTTTG GGATGTGCGA GAACTGTGTT TGAAGGACTG CCATTGCCAG AGAGGACGAT TGTCTCATGG ACGGCTATCG TTTCAGCCTA TGCGCAGAAC GGTGAGCCTG TGGAGGCTCT TGAGATTTTC AGTCAGATGA GGAAGATGGA TGTGAAGCCT GACTGGGTAG CTCTCGTCAG CGTTCTCAAT GCTTTCACTT GCTTGCAGGA TTTGGAGCAA GGGAGATCTA TTCATGCTTC TGTTGTGAAG ATGGGTCTTG AAACAGAGCC TGACTTGCTC ATCTCTCTCA ACACCATGTA TGCAAAATGT GGCCAAGTAG CAACCGCCAA GATTCTGTTT GATAAGATGA AGTCACCTAA CCTGATTTTG TGGAACGCCA TGATCTCTGG CTATGCGAAG AACGGTTTTG CCAAGGATGC TATTGATTTG TTTCATGAGA TGATCAATAA AGATGTCAGA CCTGACACCA TCTCTATAAC ATCTGCCATT TCAGCTTGCG CTCAAGTAGG TTCTCTTGAG CAGGCCCGCT GGATGGATGA ATATGTAAGC AGGAGTGACT ACAAGGATGA CGTTTTCATA AGCAGCGCTT TAATCGATAT GTTTGCTAAA TGCGGAAGTG TAGAGTGCGC AAGATCAGTT TTTGACCGAA CACTTGACAG GGATGTTGTG GTGTGGAGTG CTATGATTGT CGGGTATGGA TTGCACGGGC AGGCAAGAGA AGCAATCAGT CTGTACCGTG CAATGGAGTG TGGTGGAGTA CATCCCAATG ACGTCACTTT TCTGGGGCTT CTCATGGCCT GTAACCATTC AGGCATGGTA AGAGAAGGCT GGTGGTTTTT CAACCGGATG GCGGATCACA AAATAAATCC GCAACAGCAA CACTATGCAT GCATCATTGA TCTACTTGGT CGTGCTGGTC ATCTAGATCA AGCTTATGAA GTGATCAAAT GCATGCCAGT CCAGCCCGGT GTAACGGTTT GGGGAGCACT CCTAAGCGCT TGCAAAAAGC ATCGCCACGT TGAACTGGGA AAATACGCAG CTCAGCAGCT ATTCTCAATA GACCCATCCA ACACAGGCCA CTATGTGCAG CTCTCTAATC TGTATGCTGC AGCGCGTTTG TGGGACTGTG TTGCAGAGGT GCGAGTGAGG ATGAGGGAGA AAGGATTGAA CAAAGACGTT GGATGTAGCT GGGTTGAAGT AAGGGGAAGG TTGGAGGCTT TCAGAGTGGG TGATAAGTCA CATCCGAGAT ACGAAGAGAT AGAGAGACAA GTAGAGTGGA TAGAGAGTAG ACTGAAGGAA GGTGGATTTG TGGCTAACAA GGATGCTTCA TTGCACGATC TCAACGATGA AGAAGCTGAA GAGACTCTGT GCAGCCACAG CGAGAGGATC GCAATTGCAT ATGGGCTTAT AAGTACACCC CAAGGGACAA CACTGCGGAT CACAAAGAAT CTGAGAGCAT GCGTGAACTG TCATGCCGCT ACAAAGCTTA TCTCGAAGCT TGTGGGCAGA GAGATTGTTG TGAGAGACAC AAATAGGTTC CACCATTTTA AGGATGGAGT TTGTTCGTGT GGTGATTATT GGTAA 
Length2085
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4828640.. 4830836
Download Sequence
A.thaliana
AGI-codeAT3G12770.1
Descriptionmitochondrial editing factor 22
TAIR curator summaryEncodes a pentatricopeptide repeat protein (PPR) protein involved in mitochondrial mRNA editing.
Alias[MEF22][mitochondrial editing factor 22]
Gene coexpression
MR
MR Locus Description
30.133 Ahg477013 Terpenoid cyclases family protein
43.9773 Ahg950383 Auxin efflux carrier family protein
57.0789 Ahg917658 subtilase 4.13
64.467 Ahg481664 transposable element gene
64.846 Ahg334132 Aluminium activated malate transporter family protein
69.1954 Ahg923932 WAG 1
73.4439 Ahg906590 Cysteine/Histidine-rich C1 domain family protein
83.0301 Ahg888149
83.6959 Ahg937996 Eukaryotic aspartyl protease family protein
85.5395 Ahg474043 Oleosin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression