Detail



ID : Ahg904298

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|904298|Al_scaffold_0003_1426
Sequence
ATGGTAGCTA AGGAAGAAGA ATTCACTGAA AATCTGAAAC AGCAGCTCGT GAAGCTCTTT GATGCGTCTC TGAAATTAAC GGTTCCAGAT GAACCTAGTG TTAAGCCTTT GGTTGTGGTT GGAAAATTCG AAGATTACCA ATGTAACAAT GCAATGGGAC TATGGTCCAA AGTTAAAGGA AAGGGTACTC AATTCACTCG TCCTTTAGCT GTTGCAGAGG CCCTTGTTAC AAATCTCCCT ACTTGTGATA TGGTGGAATC ATGCTCTGTT GCACAACCTG GATATGTTAA TGTTAGTATT GAAAATATGC TTATCAATGG GATTGAGACA TGGGCGCCTA CTCTTTCAGT TAAGAGAGCT GTAGTTGATT TTTCCTCTCC AAATATTGCA AAGAAAATGC ATGTTGGTCA TTTAAGATCA ACTATCATCG GTGACACCAT AGCTCGTATG CTCGAGTACT CTAATGTTGA AGTTCTACGC AGAAACCATG TTGGTGACTG GGGAACACAG TTTGGCATGT TAATTGAGTA CCTCTTTGAG AAATTTCCTG ATTCAAATAG TGCGATGGAG ACAGCAATTG AAGATATTCA GTCGTTATAC AAGCCATCAA AAACGAAATT TGATGCAGAT TTAGACTTTA AGCGAAAGGC ACAACAGGCC GTGGTCCGTC TACAGGGTGG AGATCCTGTA TACCACAAGA CTTGGCAAAA ACTTTGTGAA ATCAGCCGAG CCGATTATGC CGAGATTTAT CAACGCCTTC GAGTTGAGCT TGAAGAAAAG GGAGAAAGCT TTTACAAACC TTATATTGCT AACATGATTG AGGAATTGAA TAGCAAGGGT TTGGTTGAAG AAAGTGATGG TGCTCGTGTG ATGTTCATCA AAGACTTCAA GAATCCATGC ATGCTTGTTA AGAGTGATGG TGGTTTTACC TATGACACAA CAGATCTTGC TGCTCTTTGG TATCGGCTTA ATGAAGAGAA AGCTGAGTGG ATTATTTATG TGACAGATGC TGGCCAGCAG GAGCACTTTG ATAGGTTCTT CAAAGCTGCT AGACAAGTAG GTTGGCTTCC AGACAATGAT GAAACTTACC CTAGAGTTAG CCATGTTAAG TTTGGTGTAG TCAAGGGGGA AGATGGCAAG CGGTTTAGAA ATCGCGATAG AGAAATAGTC CCTCTAGCTG ATTTGCTAGA TGAGGCCAAG ACTCGCAGTA AAGCTGCCCT TATTGAGCGT GCTAAGGAAA AAGAATGGAC ACCCGAGGAG CTGGACCAAA CAGCTGAGGC AATTGGATAT GGTGCGGTGA AGTATGCTGA CTTGATGAAC AACATATCTA CAGATTATAA GTTCAGCTAC GATAAAATGC TTAATGACAA GGGAAATACA GCTGTGTACC TTCTTTACGC TCATGCTCGG ATCTGCTCAA TCATCAAGAA GTCTGGCAAA GACATAGATG AGCTTAAAAA AACTGGAAAG TTAGCATTGG ACCATGCTAA TGAAAGAGCA CTTGGACTTC ATTTGCTTCA ATTTGCTGAG ACGGTTGAGG AAGCATGCAC CAAATTGTTA CCGCACATAC TGTGCGAGTA CCTCTACGAT TTATCTGAAC ACTATACGAA ATTCTACTCC AATTGTCAGG TCAATGGTTC AGCAGAGGAG ACAAGCCGTC TCCTACTTTG TGAAGCAACG GCCATAGTCA TGCGGAAATG CTTCCACCTT CTTGGAATCA CTCCTGTTTA CATGATATGA 
Length1740
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5361191.. 5364552
Download Sequence
A.thaliana
AGI-codeAT4G26300.1
DescriptionArginyl-tRNA synthetase, class Ic
TAIR curator summary
Alias[emb1027][embryo defective 1027]
Gene coexpression
MR
MR Locus Description
14.6629 Ahg947166 ENTH/ANTH/VHS superfamily protein
16.9115 Ahg889149
19.799 Ahg926115 Chaperone DnaJ-domain superfamily protein
20.9762 Ahg934335 TSL-kinase interacting protein 1
22.0454 Ahg471300 Tetratricopeptide repeat (TPR)-like superfamily protein
36.2491 Ahg328336 RING/U-box superfamily protein
40.694 Ahg486057 Sodium Bile acid symporter family
47.7912 Ahg494445 F-box family protein
49.7092 Ahg940676 alpha/beta-Hydrolases superfamily protein
62.546 Ahg488790 SNARE associated Golgi protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression