Detail



ID : Ahg934335

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|934335|scaffold_402323.1
Sequence
AGTTGAAATC AAAAGCATGG ATGCTTAAAC AGTTTGCACA TTATTGCGAA ATGCAAGCCG AGCTGAAACC CGAAGGTCCT AACGGTGAGG GCCGTTTATC AAACCAGAAC AGCAACCCCA ATTTACTCTC TTCTGCTTCT ATCACTGTTG CTCAGTTTCC TGCTAAGAAG CCGACTAGAC AATGGGCTGC TTGGACGCAT CAAGAAGAGG AAAGCTTCTT CACTGCGCTT CGCCAAGTTG GAAAGAATTT TGAGAAGATT ACTTCTCGTG TCCAGAGCAA AAACAAGGAC CAGGTCAGGC ATTACTATTA TCGTTTGGTG AGGCGTATGA ACAAACTTTT GGGCCCGGAA CTGAGCCTTG ATGCTAAGAA CCCAAAGGAC ACAAATGCTG CAATGCTTCG ATGGTGGTCT TTACTGGAAA AGTATAGCTG CAAAGCTTCA AAACTTCACC TCAAACCCCG GAGATTCAAG CTATTTATAG AGGCCTTGGA ACACCAATTG CTGAAAGACC GCAGAAAGAG CATAAGAAAA CGGGCTTGCC AGGGAGAAAA TTTCTCTTCT GCTTCCCTCG GAAACATCTC AAGTCATAGC AGAGAAAGAG GATTGGATAA CCGTCCATTT AAACTGATTC TCTCCGACAG CCAAAATGTT AAAAAGCTAG GGCCTGGAAG AGCATCTACC AAAAATGGTG AAAGCTTAGG TGTCAACCTT GGTGACGAAA AAGAAGATAC AGCCTTTGGG AGAGGTGGAA GGCAACGGCG AAAACAAGGT TATAGAAAAT GGGAAAAAGC TGCAATAGAT GGGGTCTCTC TAGTTGCTGA TGCTGCAGAG CATTTGGAAC GAACATCAAT TGACAAAGAT ATGGATGATC AAACAGATTT AGGTCCCACA AGATATTTAA CCGGAAAGTC TCCACTTTCT CTATGCTCAT CTGGTGACAT TCTTCTCAGT GACACCAATA TGCAGTTCTC TGCCAAGCTG AAACTTCAGC TGTTCCCGAT TGATGAATGT ACTCGAAGAT CCTTGGAAAT GGATAAGCAC AACCCGCATC TTGAACTTAC TCTTAGTAAT CGCAAGAAGA TATCATCTGT ACTGGAACAT CTCAATCGTA AATGGGGAAG CGCCAGTTGT GCGACTGGAG AGCTACTGCT ATTTCCTTAC AATGCACGAA AAGAAACTGT AACGTGCCAT CAGAGGTGGA CCCATGACTC TTTTCTAAGC GCAGCAGAAG TGCATTCAAT GCTTGGAAGT CCCTCGGTTT TCCGCTTAAG GTATGGTTGG TTTGTCCATG ATGCATCAGG TTCTATTATT TCTCAAGTTC CAACCTCAGA TTCTTGCCCT TCACTCGAGG ATGACATGAA TGTGGATGGG GTGAACGAGG TCAACATGCT CCTTACTGAA TCAGGACCCT TGTCTGTGCA TTCAACTGCC GAACAAGCGA CATCTGTAGA ACCCAGCCAG GGTCTAGTAT GTGCCTCTGG TGAAATCCAT GATCGTCTCG CAGAATCTAG GGATGATTAT GAACCTGCTT CAATGACTAT TACTCCACTT GAGCATTTGA GCAGTGGTAA TGCACAATCA GCAGGAGAAT GGGCTGATAG TCTTACTAAC ATAAGTATAG GTGATCTACT TTCTGAAGTG CCCGATGACA TAGATAGTGA TGGTGTGGAT CCACCTGCCA CCGAGGGTTC ACATTACCTC CTTCGAGATG TCCCATTTGC CTCTGACTCT TTTGATGCTG CAATTGCTGC TCATATACTA AGACACCAGA GCAAGCCAAG TGCTTTACTA CCGCTGACTT CTGGCTCTTC CTCTCTATGG GATGATGAAG AAACACGTGA TGCCTTCTCT TTCCAAAAGA ATCGTCTCGC AGATTCCACC GAGTTGGCTA GTGTTGCTTC TCACAGAGTA AATGGAGAGC CTTCACAATT GGTGGAGGTT TTATCCGGCG ATGAGGGGTC TTGTAACCCT TCTGACCATG GAGATCCAAT GGAAGAGGGT CCAACAGACC CTCAAACGAT GGATTCTCCT GGAAAGACCC CTTGTGGACT TGCGGATGTA TATTGGCCCG ACTCGTTAGG ACCACTGGAT TTAGACATTA GATCTTCAAA GTATACAGAG GATTTGCTCC TAAGTGAGAG CCTCGGAGGT TTGAGCCGTC TGATAGCGAC CAGCCTTGAT GCGTTTCAGA ACTGCTCGCT CTTTGGGTTC GACAATAAGA AGGACAAGTC TAACATGGTC TGAAATGGAA CCAAAGCTAA AGC 
Length2263
Protein Sequence
Protein Residue
Map Locationscaffold_4: 16694376.. 16698106
Download Sequence
A.thaliana
AGI-codeAT2G36960.3
DescriptionTSL-kinase interacting protein 1
TAIR curator summaryArabidopsis thaliana myb/SANT domain protein
Alias[TKI1][TSL-kinase interacting protein 1]
Gene coexpression
MR
MR Locus Description
8.48528 Ahg482602 Integral membrane Yip1 family protein
8.83176 Ahg481207
15.0665 Ahg488346 SIN3-like 2
15.748 Ahg476400 TRF-like 6
19.4422 Ahg922436 RING/FYVE/PHD zinc finger superfamily protein
19.4422 Ahg481492 peroxin 10
20.7846 Ahg490504 RNAhelicase-like 8
20.9762 Ahg904298 Arginyl-tRNA synthetase, class Ic
34.4093 Ahg475389 FAD/NAD(P)-binding oxidoreductase family protein
35.7771 Ahg948334 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression