| Annotation |
|---|
| Description | jgi|Araly1|904533|Al_scaffold_0003_1661 |
| Sequence |
ATGGGAACGA AGTTCTTAGC TCTGGTTTTG TCTCTGTGTC TTGTTCTCTC AAGCTTCTAC GAAGTTTCTT GCCAGGATGA AGGAAGTGGA AGTTTGAGTA CTTTAGATCT AATCGAGCAT GAATATCAAA CTAGTGTCAA TTCTCTCCAA GGCAATGAAG TAGATCAAAC TGAGACCAGT GGTCAGAAAA ACAGTACAAG TAACAACACT ATTTCTTTGT CTTTATCTGA AGAACCAGTG GAAACTCTTA AAGAATCTGT TGATACATCA GCTGAGTTAG GAGCTGTTAC TGATGAAGCC GATAAACCTT CGAGTATGTT GGACCATATC GAACTTGAGT TCGAAGCACA TGTCAATGAA CTTAAAGAAG CTGGATCTGA TGGTATCAAC AAAGTTGATG AGTCTAAGGA TGATGAAGAA GCTGCTAGGA GACAGAAAAT GTTGGAAGCC ATTGAGCGAG AGTTTGAAGC TGCTCATGCT GGATTTGAAC AACTAAAGAT TGATGATTCC ACCCAAGGAT TAGATGATGA ACAATCTGCA AAGAGACAAA GCATGTTGGA TGAGATTGAA CGTGACTTTG AAGCTGCTAC AAAAGGTCTT GAACAACTAA AGGCTGATGA TATAACCGGA GTCAACGATG AAGAACACGC TGCAAAGAGA CAAAAGATGC TGGAAGAGAT CGAAAGAGAG TTTGAAGAAG CTACAAAAGG TCTTGAAGAA CTAAGGCATT CTACCTCAAG CACAGATGAT GAAGCACACT CTGCAAAGAG ACAGAGTATG TTAGATGAGA TTGAACGCGA GTTTGAAGCT GCTACAAGTG GTCTTAAAGA GCTAAAGATT AATGCTTTCA CTATCAAAGA TGATTCTTCT GAGATAGCTA GATGTTATGC CTTCTTTACA GATGCCAAAA GACAAAGTAT GCTAGATGCA ATTGAACGCG AGTTTGAAGC CGTTACTGAG AGTTTTAAAT AACTTGAAGA TATCGCCGAT AACAAAGATG AAGGAGACGA CCAATCTGCA AAGAGGCAAA GTATGTTGGA TGAGATTGAA CGTGAATTTG AAGCTGCTAC AAATAGTCTT AAGCAACTAA ACCTTGACGA TTTCACTGAA GGAGATGATA ATGAACAATC TGCAAAGAGA CATAGTATGC TTGAAGCTAT AGAACACGAG TTTGAAGCTG CTACAAAAGG TCTTGAAGAG CTAAAGGCTA ATGACTCAAC CGGCGACAAG GATGATGATG AACACGTTGC AAGGAGAAAA ATTATGCTTG AAGCTATTGA ACGCGAGTTT GAAGCCGCGA CAAGAGGCCT TGAAGAGTTA AAGAATGAAT CAGAACAAGC TGAAAACAAT AGAAAGAGTA TGTTGGAGGC AATCGAACGC GAATTTGAAG CTGTTACAAA TGCCAAGGCT AATGGAGAAG ACTCTGCAAA GAATCCATCA ACCATAAGTA CAGTGCAGAA AACTTCTGGC GGATACAATG CTGGTTTAGA AGGTCTTCTA AAGCCTGCAG ATGGTGTATG TGGTTGTTTC AACAAAGAAA AAGATGGCCT TCAGGCAGAC ACGGATTCTT CGATTAACAT AGCAGAGATA CTCGCTGAAG AATCCAAATT ACAGGGCTCA GGGACCTCTC CCCTCACCAC ATCATTGAAC AATCTTGTTG ATACTCATAG AAAAGAAACG TCCTCAAAGG TAGGCTCAGT CCTTGGCTCA TCTTCATCAG TTACTTCTAC CACAAGCGAA TCAGCAGCTA CATCAGAGAG CATAGAGAGC TTGAAGCAAA CACTAAGGAA GCTACGCGGT CTAAGCGCAC GTGATCTCGT AAACCACCCG AATTTCGATG CGATTATAGC AGCCGGTACA CGTTACGAGG TACTCAGCTC AGCTTCTATT GGTTACATCT CTTTGCTAGC CAAATACAAA ACCGTCATTA AAGAAGGACT CGAGGCTTCT CAGAGAGTCC AGATTGCTCA GACCCGAGCG AAACTGCTAA AAGAAACCGC AATGGAGAAG CAGAGAACCG TAGACTCGGT ATTCGCAGCA GCAAAGACCA CTGCTCAAAG AGGAGACGCG TTGCACATCA GAATCGTGGC GATCAAGAAA CTGTTGGCAA AGCTTGAAGC AGAGAAAGTG AGCGTTGATT CAAAGTTCAC CTCTTTAACG ACGAGTCTGT CAGAGCTTCT CAAGGAGGCT TCACAGGCTT ACGAAGAGTA CCACGAGGCG GTGCATAAGG CAAAGGACGA GCAAGCGGCT GAGGAATTTG CGGTGGAGAC GACAAAAAGA GCAGAACATA TTTGGGTCGA GTTTCTTAGT TCACTTAATT GA |
| Length | 2322 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 6335657.. 6340434 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G15950.1 |
| Description | DNA topoisomerase-related |
| TAIR curator summary | Similar to TSK-associating protein 1 (TSA1), contains 10 EFE repeats, a novel repeat sequence unique to plants. Expressed preferentially in the roots.Protein is localized to ER bodies- an endoplasmic reticulum derived structure. Loss of function mutations lack ER bodies. |
| Alias | [NAI2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg897878 | Phototropic-responsive NPH3 family protein |
| 4 |
Ahg482950 | jacalin-related lectin 22 |
| 7.48331 |
Ahg479097 | PYK10-binding protein 1 |
| 8.88819 |
Ahg926415 | MLP-like protein 28 |
| 11.6189 |
Ahg896925 | HXXXD-type acyl-transferase family protein |
| 17.8885 |
Ahg479102 | Mannose-binding lectin superfamily protein |
| 21.6333 |
Ahg479130 | translationally controlled tumor protein |
| 23.4094 |
Ahg921527 | |
| 29.9333 |
Ahg473845 | triacylglycerol lipase-like 1 |
| 30.8545 |
Ahg911616 | FMN-linked oxidoreductases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|