| Annotation |
|---|
| Description | jgi|Araly1|905735|Al_scaffold_0003_2863 |
| Sequence |
ATGCTCTTCT TCTTGTTCTT GTTCTTCTTC TACTTACTCT TATCTTCATC CTCCGATCTA GTCTTCGCCG ACCGTCGTGT CCTTCACGAA CCATTCTTCC CTGTAGATTC ACCACCACCG TCACCACCAT CACCACCACC GCTTCCTAAG CTTCCATTCT CTTCAACTAC TCCACCATCT TCAGACCCAA ATGCTTCACC TTTCTTCCCT TTATACCCTT CTTCTCCACC ACCACCATCA CCAGCCTCAT TCGCTTCTTT TCCGGCGAAT ATCTCATCTC TAATCGTCCC TCACGCCACT AAATCACCAC CTAACTCCAA GAAACTCCTT ATAGTCGCTA TCTCCGCCGT CTCCTCCGCC GCTTTAGTCG CTGTACTTAT CGCTTTACTC TATTGGCGTA GAAGAAGAAC CAACCAAGAT CTTAACTTCT CCGATGATAG CAAAACTTAC ACCACCGACA GTAGCCGTAG AGTCTACCCT CCTCCTCCTC CGGCAACGGC TGCTCCAACA CGACGCAATG CGGAGGCTAG AAGTAAACAG AGGTCCACGA CAAGAACGAG CTCCACCAAT AACAGCTCTG AGTTTCTTTA CTTAGGAACA ATGGTGAATC AAAGAGGAAT TGAAGAACAA TCTCTTAGTA ATAATGGATC AAGCTCAAGA AAACTTGAAT CTCCAGATCT TCAACCACTT CCTCCATTGA TGAAACGAAG TTTCCGGTTA AATCCAGATG TTGGTTCAAT CGGAGAAGAA GAAGAAGAAG AAGAGTTTTA CTCTCCACGT GGCTCACAAA GCGGGCGAGA AACATTAAAC CGGGTCGGAG TTCCGGGTCA AAACCCTAGA TCTGTTAACA ATGACACTAT CTCTTGCTCA TCTTCAAGCT CTGGTTCACC AGGAAGATCA ACGTTTATCA GTATCTCTCC TTCAATGAGT CCTAAAAGAT CTGAACCAAA ACCTGTAGTA ATCACCACAC CAGAACCACC GGCAAGGATT TCTCCGGCGG AGTTAACAGA TTATAGATTT GTTAGGTCTC CGTCACTATC GTTAGCTTCT TTATCGTCGG GATTTTGTCC GGTGAAAAAC TCCGATGAAG GAAGATTGAA TCAAATCTCT AGATCTCCGA CGGTTACATC ACTCACAACT TCACCGGAGA ATAACAAAAA AGAGAACTCT CCGTTATCAT CTGCTTCAAC TTCACCGGAG AGACGACCAA ATGATACACC AGAAGCTTAT TTGAGATCTC CGTCGCATTC TTCTGCTTCG ACATCACCGT ATAGATGTTT TCAGAAGTCT CCGGAGGTGT TACCGGCGTT TATGAGTAAT CTCCGGCAAG GTTTGCAATC TCAGTTACTT TCTTCTCCTT CAAATTCTCA TGGAGGACAA GGTTTCCTTA AGCAGTTAGA TGCATTGCGT TCTCGTTCAC CGTCGTCTTC TTCTTCATCA GTTTGTTCTT CACCGGAGAA AGCTTCTCAC AAGTCACCGG TTACATCTCC GAAGTTGTCT TCCCGGAATT CGCAGTCTCT AGCATCATCT CCGGATAGAG ATTTTAGTCA TAGCTTAGAT GTATCACCAC GGATTTCGAA CATTTCACCT CAAATTTTAC AGTCTCGAGT GCCTCCGCCT CCGCCACCTC CTCCACCATT GTGGGGACGA CGGAATCAGG TGACTCATAA GGCGGAGACA ATCTCGAAAC CGCCTTCTCT TACACCGCCT TCACATCCAT TTGTGATATC ATCCGAAAAC TTGCCAGTGA CTTCTCCAAT GGAGACTCCA GAGACGGTTA GTGCCAGTGA GCCAGCGGAT GAAACTCCGA AACCGAAGCT AAAGGCGTTA CATTGGGATA AAGTTAGAGC AAGTTCGGAT CGTGAGATGG TTTGGGATCA TCTTCGATCA AGCTCTTTCA AATTAGATGA AGAGATGATT GAGACGTTGT TCGTGGCAAA GTCGTTAGAT AACAAACCAA ATCAGAGTCA GACAACTCCA AGATGTGTTC TCCCGAGCCC GAACCAAGAG AACAGAGTCT TGGACCCTAA GAAGGCTCAG AATATTGCGA TACTGCTTCG CGCACTTAAT GTCACTATAG AAGAAGTTTG TGAGGCTCTT CTTGAAGGCA ATGCTGATAC ACTTGGGACT GAACTTCTTG AGAGCTTACT GAAGATGGCA CCGACAAAAG AAGAAGAACG CAAATTGAAA GCGTATAAGG ATGATTCGCC CGTTAAGCTT GGACATGCTG AGAAATTCCT TAAGGCAATG CTGGACATCC CTTTCGCCTT TAAAAGAGTT GATGCGATGC TCTATGTTGC TAACTTTGAG TCTGAGGTTG AATACCTGAA AAAATCTTTT GAGACTCTTG AGGCTGCTTG TGAGGAACTC AGGAACAGTA GGATGTTCTT AAAGCTTTTG GAAGCGGTTC TAAAGACCGG AAACCGTATG AACGTTGGAA CAAACCGAGG GGATGCTCAT GCGTTCAAGC TTGACACACT CCTCAAGCTA GTCGATGTTA AAGGCGCTGA CGGGAAAACA ACTCTCTTGC ATTTCGTTGT ACAAGAGATA ATCCGAGCAG AAGGCACACG TCTCTCAGGT AACAATACAG ATGACATCAA ATGCAGGAAA CTAGGCCTCC AAGTCGTATC AAGTCTCTGT TCAGAGCTAA GTAACGTTAA GAAAGCTGCT GCAATGGACT CAGAAGTACT AAGCAGCTAC GTCTCCAAGC TTTCTCAAGG GATCGCCAAG ATTAACGAAG CTATCAAAGT CCAATCAACG ATGATAGAAG AAAGCAACAG TCAGAGATTT TCGGAATCGA TGAACACGTT TCTGAAAAGA GCTGAGGAAG AGATCATCAG AGTACAAGCT CAAGAGAGCG TCGCATTATC ACTTGTGAAA GAAATCACAG AGTATTTCCA CGGAAACTCG GCTAAAGAAG AAGCGCACCC GTTTAGAATA TTCTTGGTGG TTAGAGACTT CCTTGGAGTA GTAGACAGAG TCTGCAAAGA AGTAGGGATG ATAAACGAAA GAACAATGGT TAGTTCTGCT CATAAGTTCC CTGTTCCAGT GAATCCAATG CTGCCACAAC CTCTTCCTGG ACTCGTAGGA CGAAGACAAT CTTCTTCTTC GTCGTCTTCT TCTTCCGCTT CGTCATCAGA CGACGAACAT AACTCATCTC ATTAG |
| Length | 3165 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 12207052.. 12210598 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G25500.1 |
| Description | formin homology 1 |
| TAIR curator summary | Poly-L-proline-containing (PLP) protein that form part of the signal-transduction cascade that leads to rearrangement of the actin cytoskeleton. AFH1 is a nonprocessive formin that moves from the barbered end to the side of an actin filament after the nucleation event. |
| Alias | [AFH1][AHF1][ATFH1][FH1][formin homology 1][ARABIDOPSIS THALIANA FORMIN HOMOLOGY 1][FORMIN HOMOLOGY 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg473267 | Phototropic-responsive NPH3 family protein |
| 5.19615 |
Ahg470145 | Eukaryotic aspartyl protease family protein |
| 8.88819 |
Ahg943915 | Leucine-rich receptor-like protein kinase family protein |
| 10.583 |
Ahg484109 | Microtubule associated protein (MAP65/ASE1) family protein |
| 15.1987 |
Ahg480606 | EXORDIUM like 5 |
| 16.0624 |
Ahg486233 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
| 17.2337 |
Ahg474314 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein |
| 18.0278 |
Ahg471067 | RNA-binding KH domain-containing protein |
| 25.923 |
Ahg473518 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 27.6767 |
Ahg490872 | arabinogalactan protein 18 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|