Detail



ID : Ahg905841

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|905841|Al_scaffold_0003_2969
Sequence
ATGAATTTGA GATCCTCTCA TTATTTGAAT GAGCTTCCTG ATCTCTCGAC TGCAACAAAT CTCCAAGAAT TATATCTTAA TGGTTGCATA AGTCTCGTGG AGCTCCCTTC CTCTATTAGG AATGCCATTT ATCTCAAAAT ATTAGAGCTC AGTGGATGTT CAAGTTTGGT GGAGCTCCCT TTTTCTATTG GGAATGCAAT TAATCTCCAA GACTTATATC TAAGTAATTT TTCAAGTCTC GTGGAACTCC CTTCCTCTAT CGAAAATGCA ACTACTTTAA GAAAGTTGGA TCTCAGTGGA TGTTCAAGTT TGGTTGAACT CCCTTCTTCT CTTGGGAGTG CAATTAATCT CCAAGACTTA TATCTCATTA ATTGTTCAAG TCTGGTGAAG CTACCTTCTT CTATTAGAAA TGCAGCTAAT CACAAAATAT TGGATCTCAG TGGATGTTCA AGTCTGGTGG AGCTCCCTTC CTCTATTGGA AATGCAACTA ATCTCCAAAC ATTAAATCTT AGTAATTGTT GCCGTTTGGT AGAGCTCCCT TCCTCTATCG GAAATGCAAC TAATCTCCAA ACATTGAATC TCAGTGGATG TTCAAGTTTG GTGGAGCTCC CTTCCTCTAT CGGAAATGCA ACTAATCTCC AAACATTGAA TCTCAGAAAT TGTTTAAGTT TGGTAGAGCT ACCTTCCTCT ATCGGAAAGG CAACTAATCT CCAAACATTG AATCTCAGTG ATTGTCACCG ATTGGTAGAG CTACCTACCT CTATCGGAAA TGCAACTAAT CTCCAAACAT TGAATCTCAG AGATTGTTTA AGTTTGGCAC AGCTCCCTTC CTCTATTGGA AAGGCAACTC ATCTCCAATC ATTGAATCTC AGTTATTGTA CAAGTCTGGT GGAGCTCCCT TCCTTAATTG GAAATGCTAC TAGTTTCCAA AAATTGAATC TCAGTTATTG TACAAGTCTA GTGAGGCTCC CTTCCTCTAT CGGAAATGTT TCTAATCTCC AAACATTGAA TCTCAGGGAT TGTAAAAGTC TTGTGGAGCT TCCTTCTTCT ATTGGAAATT TAACTAAATT AGATTTAGAT ATCCGAGGAT GCTCAAGTTT GGTGGAGCTG CCTTCCTCTA TTGGGAATTT CATAATGAAT CAAGATGGTG GGAATATCTA CTCTTTCAAT ACATGCACAA GTTTGTTGCA AATCCCTTCC TCTATTGGGA ATGCCATTAA GCTTGAAAGT TTGAATTTTT ATGGTTGCTC AAGTCTTGTG GATGTCCCGG CCTCTATTGG AAACCTAATT AATCTCGACG TGTTGATTTT TAGTGAATGC TCAAGTCTTG TGGAAATCCC GACATGTATT GGAAATCTAA TTAATCTCAC TTATTTGGAT TTTAATGGAT GCTCAAGTCT TGTGGCTATC CCGGCCTCTA TTGGAAACCT TCATAAACTG AGGATGTTGG CGATGAAAGG ATGCTCCAAG TTAGAGATTC TTCCGGGCAA CGTCAACTTG AAATCTCTCG ATAGACTTGT TCTTAGTGGC TGCTCGTCGT TAAGATGTTT TCCTGAGATC TCCACAAACA TCAGAGAACT CTATCTCAGT GGAACTGCGA TAGAAGTGGT GCCTTCATTT ATCTGGTCAT GTTTGCGTCT TGAGACATTA GATATGTCAT ATTGCAAAAA CCTCAAGGAA TTCTTGCATA CTCCTGACAG CATCACCGGG CATGATTCAA AAAGAAAAAA AGTTTCTCCA TTCGCAGAAA ATTGTGAGTC TTTAGAGAGA CTATATTCCT CCTGCCACAA TCCATATATC AGTCTCAACT TTGATAATTG CTTTAAACTA AATCAAGAAG CAAGAGATCT CATCATCCAG ACATCGACTC AACTTACGGT CTTACCCGGT GGAGATATAC CTACCTACTT CACTTATCGA GCTAGTGGAG GTTCTCTAGT AGTGAAGTTA AAGGAGAGGC CTTTCTGTTC AACCTTGATA TTTAAGGTTT GCATTATTCT GGTTAGTAAG AAGAATGGTT AA 
Length2022
Protein Sequence
Protein Residue
Map Locationscaffold_3: 12833815.. 12835836
Download Sequence
A.thaliana
AGI-codeAT5G44510.1
Descriptiontarget of AVRB operation1
TAIR curator summaryEncodes TAO1 (Target of AvrB Operation), a TIR-NB-LRR protein that contributes to disease resistance induced by the Pseudomonas syringae effector AvrB.
Alias[TAO1][target of AVRB operation1]
Gene coexpression
MR
MR Locus Description
9.74679 Ahg482366 Protein with domains of unknown function (DUF627 and DUF629)
48.1664 Ahg944991 low-molecular-weight cysteine-rich 63
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression