Detail



ID : Ahg906028

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|906028|Al_scaffold_0003_3156
Sequence
ATGGTGCCCG GTAATTCCCA TCTCTCATCC TCAACGTGTT TCACCTTTGC GGAAATCAAC CATGATAGAA CCACCAAATT ATCGAAAAGA GATCTTGTTT ACCCGAAAAG AAACCCCCCC CACCAAGCTA AGGCGTACGG CGAGCTTCTT CTCAGGGACA CGATTTCATC TACCGGAACG GCCATGTTCC TCTGGTTCTC CTCCCCTGCT TCACATCCTG ACCAAACCCG TCAAACGTTG CCCCTACCAT CACCGGAGAT GCATGTTTTA CTGCAAAATC TCTCCCCATC TCCGTACAGC GGCCGTCGCA CTCAAGATCT TCTATTGCCC GTCAAAAAGA AACTAGATTC ACCTAGGTTT TTCGATCCTA AAATCAATTG TTTGAAGAAG AAAGGTATCT TGTTCCCATC TCCAATGAGT CGATGGTGTG ACTATTGTCA CCAAAGCTCC ATCAACTTTT TATCTCCGAC TCACTTATTT ACCAAGCTCA AGCAATCCCT CACCAACAAG ATCGTTAAGG CTCGGAGCTC TCGGGACTAC AAAAAAAGTT TCAGACTTTT TGTGGAAAAC CCTGAACCTT CGTCTCACGC TCTTGAAAGT AAAAGATGGA AGAAGAACGG CATTATGATC CCGTCTCCAA GGAGAGGTGG TTACCGAAGC TTCTTCCATC TTTTCCCCTC ATTTCCTCTG TTTACTAAAA TCAGGCAAGT TCAATTCAAC ATCTTTAAGG TTAGTATTCA TGAATCCGAA AGTTTGAGGA AGAATGGCAT TATGATCCCG TTTCCATGGA GCGGTGGTTA CCGAAGCTTC CCCAACTTTT TATCTCCAAT CCCACCCGAC TATAGAACCA AAGTCAACCA TCTCCTTGCC GATGAGCAAC TCCAGCTCAC CTTTCTCGTG CCGGCGAGAA CCTCGGTTAT GGAACCCTCT TCAACGTCAT CTCGTCTCTT GACAATGACC ACTTTGTCGT CCATCGATTC ACTCGTGGAA GATCATTCGC TAGCCGTGAC CTCACATGTG CCAGAATGCT TAATTGCTTT TGTCGCAAAG CTCTCATGGA ATCCTTTTCG TTTCACCTTA TCTATCATGC TATGGCATTG GGGAATGCCT CCTTTATTTA TGTTTTAA 
Length1128
Protein Sequence
Protein Residue
Map Locationscaffold_3: 16505987.. 16507351
Download Sequence
A.thaliana
AGI-codeAT3G28923.1
Description
TAIR curator summaryPseudogene of AT5G01080; beta-galactosidase
Alias
Gene coexpression
MR
MR Locus Description
2 Ahg946200
5.2915 Ahg949079
17.2627 Ahg926111 Expressed protein
31.289 Ahg479449 Protein of unknown function (DUF677)
42.4853 Ahg495016 Putative methyltransferase family protein
43.4396 Ahg487623 Mitochondrial transcription termination factor family protein
45.3762 Ahg495472 ribosomal protein L11 methyltransferase-related
50.1199 Ahg492831 other RNA
50.3488 Ahg480473 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
62.45 Ahg913255
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression