Detail



ID : Ahg906184

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|906184|Al_scaffold_0003_3312
Sequence
ATGAAAGTCA CTAGCTCCTC TCGCATTCTA ATAATCTTGG CCGCCCTTGT AGGTGCTCTT GTTGTTCCCT CGAAGGCTCA AGACAGCCAG CAAGACTATG TAAATTCTCA CAACCAGGCA CGATCGCAGG TAGGCGTAGG CCCCTTGCAA TGGGACGAGG GACTTGCAGC CTACGCTCGG AGCTACGCAA ACCAACTAAA AGGCGACTGC AGACTCGTAC ATTCCGGTGG CCCTTACGGG GAGAACTTGG CCAAGAGTGG CGGTGATTTG TCTGGTGTTG CTGCCGTGAA TTTGTGGGTA AACGAGAAGG CTAACTACAA CTATAATACA AACACGTGCA ATGGAGTTTG CGGACACTAC ACTCAGGTCG TTTGGAGAAA TTCGGTGAGA CTCGGATGTG CTAAAGTGAG GTGTAACAAT GGTGGTGGAA CCATCATCAG TTGCAATTAT GATCCTCCGG GGAATTATGC GAACCAGAAG CCTTACTAA 
Length489
Protein Sequence
Protein Residue
Map Locationscaffold_3: 18031426.. 18031911
Download Sequence
A.thaliana
AGI-codeAT2G14580.1
Descriptionbasic pathogenesis-related protein 1
TAIR curator summarypathogenesis related protein, encodes a basic PR1-like protein. Expresses in flowers, roots, and not in leaves and responses to ethylene and methyl jasmonate. Salicylic acid represses gene expression.
Alias[ATPRB1][PRB1][basic pathogenesis-related protein 1]
Gene coexpression
MR
MR Locus Description
3 Ahg931178 pathogenesis-related gene 1
19.1833 Ahg891952 RmlC-like cupins superfamily protein
24.7386 Ahg477942 Uncharacterised protein family (UPF0497)
26.3818 Ahg329886 Glycosyl hydrolase superfamily protein
30.9354 Ahg355570
31.9374 Ahg890976
36.5377 Ahg489513 Pectin lyase-like superfamily protein
37.9473 Ahg894207
42.8486 Virus0398
43.4511 Ahg929930
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression