Detail



ID : Ahg906219

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|906219|Al_scaffold_0003_3347
Sequence
ATGGATCATA ATCATCACTA CTCATTTTCG CCTTGCAACT TCTTCCATAG ACCAAAGCCT ATCTTTGGTC TAGAAGGTCG TCAAGAAGAA GAAGAATGTG GTGTCAATGC TTATCTGGAA CATCGATGTA AGCTTCCTCT CTTCCCTATG CACGGTGAAG ATCACCTCAA CGGTGGTAGT GGTGATATCT GGAAGTATGG CCAATCGAAC GATCGTGATT GTTTTGGTAG AGACTCTTGT GCTTCTCTTG AGCTACAATT AACGGCCCTG GAAGTAGTTG TGGCGGGGGC TACAACGTTG TTGCCGCCGG TGAGAGCTCC TCCGATATGC ATATCGAAGT TGGTTGGGTG TGTGTCTGCC AACTTGGAAG AAGATGTAGG AGTACTTGGA GAAGAAAAAG AATTTTCGGA TGAAAGTAAT ATGAAGAAGA ACAGGAGGAA CTTGGTTAAA GGTAATACGA AGAAGAACAA GAGGAAATTT GGTTCAGGAA ACAGCTCGCA CTATGACTCG GGCACTTACA GTGCTGATGT TAAGAAGTTC AGGAAATTGG TCTTGGATAA CCATAAAGCA GCGAGTACGG AAACACGACA GAGTACCGAA ACACGACCGA TTACAGGCTC CGTCTTCCTC GAGCAGCGAG GAGATTCGTA G 
Length651
Protein Sequence
Protein Residue
Map Locationscaffold_3: 18348818.. 18351129
Download Sequence
A.thaliana
AGI-codeAT2G17950.1
DescriptionHomeodomain-like superfamily protein
TAIR curator summaryHomeobox gene controlling the stem cell pool. Expressed in the stem cell organizing center of meristems. Required to keep the stem cells in an undifferentiated state. Regulation of WUS transcription is a central checkpoint in stem cell control. The size of the WUS expression domain controls the size of the stem cell population through WUS indirectly activating the expression of CLAVATA3 (CLV3) in the stem cells and CLV3 repressing WUS transcription through the CLV1 receptor kinase signaling pathway. Repression of WUS transcription through AGAMOUS (AG) activity controls stem cell activity in the determinate floral meristem. Binds to TAAT element core motif. WUS is also involved in cell differentiation during anther development.
Alias[PGA6][WUS][WUS1][WUSCHEL][WUSCHEL 1]
Gene coexpression
MR
MR Locus Description
1 Ahg913604
14.0712 Ahg481819
16.4924 Ahg922029 glycyl-tRNA synthetase / glycine--tRNA ligase
17.6635 Virus1144
21.7715 Ahg936220
31.4643 Ahg895067 Pectin lyase-like superfamily protein
32.9848 Ahg907832
36.7423 Ahg907077 Heat shock protein 70 (Hsp 70) family protein
36.7423 Ahg941257 pollen calcium-binding protein 1
36.7423 Ahg899193 Heat shock protein 70 (Hsp 70) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression