Detail



ID : Ahg906699

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|906699|Al_scaffold_0003_3827
Sequence
ATGGAGTGGG ATAGTGATTC CGATCTCAGC GGGGGAGATG AAGTGGCGGA GGATGGATGG TTCGGCGGAG GTAACAGAGC GATTCCGTTT CCGGTAGGTA GTCTTCCTGG AACGGCGCCG TGTGGTTTTG TGGTCAGCGA TGCTCTTGAA CCTGATAACC CTATCATTTA TGTTAACACT GTTTTTGAGA TTGTTACTGG TTATCGAGCT GAGGAAGTTA TTGGTCGAAA TTGCGAGTCT TTGTCCGTTT TGTGGTATTG GTACGATGTA ACTAAGAGAG CTTGTTGA 
Length288
Protein Sequence
Protein Residue
Map Locationscaffold_3: 21464371.. 21464717
Download Sequence
A.thaliana
AGI-codeAT2G18915.2
DescriptionLOV KELCH protein 2
TAIR curator summaryencodes a member of F-box proteins that includes two other proteins in Arabidopsis (ZTL and FKF1). These proteins contain a unique structure containing a PAS domain at their N-terminus, an F-box motif, and 6 kelch repeats at their C-terminus. Overexpression results in arrhythmic phenotypes for a number of circadian clock outputs in both constant light and constant darkness, long hypocotyls under multiple fluences of both red and blue light, and a loss of photoperiodic control of flowering time. Although this the expression of this gene itself is not regulated by circadian clock, it physically interacts with Dof transcription factors that are transcriptionally regulated by circadian rhythm. LKP2 interacts with Di19, CO/COL family proteins.
Alias[ADO2][LKP2][ADAGIO 2][LOV KELCH protein 2]
Gene coexpression
MR
MR Locus Description
2.23607 Virus1080
12.8452 Virus1373
14.2829 Ahg922977 Coiled-coil domain-containing protein 55 (DUF2040)
27.7128 Ahg907538
28.4605 Virus1134
37.0135 Ahg950351
43.4971 Ahg474323 Mannose-binding lectin superfamily protein
44.2719 Virus3425
45.6946 Ahg334861 ATP binding;GTP binding;nucleotide binding;nucleoside-triphosphatases
48.0625 Ahg887541 1-amino-cyclopropane-1-carboxylate synthase 12
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression