Detail



ID : Ahg906820

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|906820|Al_scaffold_0003_3948
Sequence
GCTGCAAGTA ACTCAAATTT GAGTGATGAT AAAAAGAAAG GAAGGAAAAA CCCTAAGCCT CGTCATTTAA GTTCCTATGG GAAGCCTAAT AATACCTCAC CAGTTCAACC TTCAACAGAA ACCAAGAGCG AAGGCAAAAG AGTTTGCTTC AAAACCGATG CTGACGTAAG ACAGATGAAG CAAAACACTT CTTCTTCTAG AGAAAATCAG TTGATCATAA AAGAAACTGT CATGGAGAAT TTGCCCACTG TCACAACTCA ATTTAGGTCA GACCAAATCA ATGACCGTCA AGTTAAACCT GAGAAGTCGA AGAAGAATGC GGAAAGTTAT TGTTTAGGGT TTGAGCAATG TGTGAAGATC ATAAGACAGC TTGAGTGTTC AGGTAATGTT GAGAGCAGTT TTAGACAAAA GTTTTTGACT TGGTTTAGCC TAAGAGCGAC AGCTCAGGAG ATCAATACTG TCAAGACATT CATACATGCT TTCAAGGATG ATTCAACGGC TCTGGCTGAA CAGCTCGTTG ACACATTCTC TGATTGCATA TGGAGAAAGG GTCCTGCGAT TGGCGATGGC GATGGAGGTG GCAGTAACGG TATCTCATGA 
Length600
Protein Sequence
Protein Residue
Map Locationscaffold_3: 22300101.. 22300782
Download Sequence
A.thaliana
AGI-codeAT2G18870.1
Descriptionvernalization5/VIN3-like
TAIR curator summary
Alias[VEL3][VIL4][vernalization5/VIN3-like 3][VIN3-like 4]
Gene coexpression
MR
MR Locus Description
13.4536 Ahg359210
17.7482 Ahg497035 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
20.8567 Ahg942700 low-molecular-weight cysteine-rich 36
20.9762 Ahg341704 RING/U-box superfamily protein
22.9129 Ahg914016 Heavy metal transport/detoxification superfamily protein
27.8209 Ahg907512 protein kinase family protein
28.5657 Ahg949143
41.8569 Ahg480402 glycine-rich protein
46.2601 Ahg316028
64.8999 Ahg342290 F-box and associated interaction domains-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression