Detail



ID : Ahg907367

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|907367|Al_scaffold_0002_448
Sequence
ATGACATTAA TCGTCAAATT CGTTGTGGAG CAGCATTGTA GTTTTCATAG CGATAATAGA TCACAGCTCA AATTCGTAAA TGGTGGTGAC AAGAGGAGAT CAAATTGCTG GAAGCTCTTT GGCATTGGGA GTCATCTCCC TGAAGTCAAT AAATCCAGAG GTCACTTTCT TCAAACAAAT TGGTCGAAAC ATGCCAAGGC TTTTGAGTGT ATACCATCCT TGAATAAGTT TATGGGCTCC AATTTCCTTT ACTCTCTAGA AAGTCAAAAG CTGGCAAGAG ATAGAGAAAT GGGTGCAAGG TCTATTGAAA ACATCGCTCC TGTAACTGTG CAAACTTTGG CACGACCAGA AATTGAAAAG GCGTGGTGTA CTCTTATAAA TCTCTCAATA AATAATACTT ACCTGAGACC TGGCATTACT CCTGCAATTG ATGATGGCAG CACTGATCGT TCATCATCTA CGAAAAGATC CACTGTTAAA GTTACATCCA GTGCTGATGG ATCTTTCTAC GCACACAATC ATCCAGAGCA TAGTCAAAGG AGTTTAAGAG GCACTGCAAA ATCATTTGAC AGTTTCTCAT CCTCTTCCGT AGGTGATAAT AACATAACTA TTGGCAAGGT TCCACGGGTC AATGATGAGG TTAGAGATTC AGTAACGGGT TGTAAATATA CAAATGGTAT GGAGATGCCA CCAATCAAAA ATTCCGCACA CCTAGTCAGA CTGGTGGAGC CTAGGGAAGC TAGTCTTGGT GAGATTGATT ATGATGACAT AATGGAGATT ATTGAGGTAG ATCAGATTGT GATGGACCAC TGCCCTTCAA GGTGTCCCAA GCAACCATCA GTATCTAAGT TTGTGGATAC ATTTGCTTCC AGAAGAGAAG AAGAGCAAGG TTTGTTTCCT GAATTATGTT CCAACTGTAG TCATGGAATA AAGCTAGGGC TTTGTCCTGA AGCTTCTACC CATGTGGAAC AAATGAAGGA TACGCTGCTT GCAATATCAA ATGAATTCCT CGACAATACT TATGACCTGG GCCCCGATCA TGTTGAACAG CTTCGTCAAA AGAGGTTACT GTTGAAAAAG CAAATCCAGC AGCTCGAGAT CCTTATCCAA AATAAAGAAA GGAAAAAATC TGAGTGTTTG GTATCTACAC CTTCTCATAA TATTCAGTAT GAAACACCTC AAACAACAAA TCATGTGGTG GTTTATACGC AGACAGATTC TCCTGACAAA TCATGTGGTG GTTTATGCCC AGCAACGGAA GGCAGATATG TAACTGATAA CTGGAATATG CCAAGAGACT ATTTAGTTTC TAAAGAGAGG TATGATATTT CATCTGGTTC TGTAGAGAGG GAACAATCTG TTTCCGAGGT TATAGATGTC ACTGATACCG AGAGTTCAAA TGACAAAAAG TGGGCCAGTC GTGATTTTCC TTGGACGAAA AATCTGGAGG TCTATAACAA AATAGTGTTT GGAAACCACT CATTTCGACC AAACCAAAGA GAGATCATTA ATGCTACAAT GAGTGGTTGT GATGTTTTTG TTTTGATGCC AACCGGAGGG GGGAAAAGCT TGACATATCA GCTCCCTGCT CTACTCTGTG CAGGAATAAC ATTAGTCATT TCTCCACTTG TTTCACTCAT TCAAGACCAG ATAATGAACT TATTGCAGAC CAATATAGCT GCTGCTTCCT TAAGTGCCGG AATGGAGTGG GCTGAACAGC TAGAGATACT TCAGGAGCTG AGCTCTGAGA ATTCTAAATA CAAGTTACTG TATGTAACAC CAGAAAAAGT GGCAAAAAGT GAATCCCTTA TAAGGCACCT CGAAATCTTA AACTCCCGTA GTTTGCTTGC TCGATTTGTT ATTGATGAAG CTCATTGTGT GAGTCAGTGG GGGCATGACT TTCGACCAGA CTACCAGGGT CTTGGTGTTC TGAAGCAGAA GTTTCCTAAC ATTCCCATGT TAGCTTTGAC AGCTACTGCA ACAACCAGCG TAAAGGAAGA TGTTGTACAA GCTCTTGGGC TGGTAAACTG TGTTGTTTTC CGGCAAAGTT TTAATCGCCC TAATCTATGG TATTCTGTTG TTCCCAAGAC GAATAAGTGT CTGGAAGATA TTGACAAGTT TATCCGGGAA AACCATTTTG ATGAATGTGG CATCATTTAT TGTCTTTCAA GAATGGACTG CGAAAAAGTC ACGGAAATGT TGCGGGCGTT TGGCCATAAA GCGGCCTTCT ACCATGGCAG TATGGATCCT GGTAAACGTG CCTTTGTACA GAAACAATGG AGCAAGGATG AAATCAATAT AATATGTGCT ACAGTGGCAT TTGGAATGGG AATCAATAAG CCTGATGTTC GTTTTGTAAT TCATCATTCT CTACCAAAGT CCATAGAAGG CTATCATCAG GAATGTGGTC GTGCTGGTAG AGACGGCCAG AGGTCATCAT GTGTTTTGTA TTACAGTTAC ACTGATTATA TTCGAGTGAA GCATATGATT AGCCAAGGAG GACTTGGCCA AGGCCAGATG AAAATGGGAT ATAATTGTAA AGCAAGTTCA GGGAGGATGC TCGAAACGAA CACGGAAAAC CTTCTCCGCA TGGTTAGTTA CTGTGAAAAT GAGGTGGACT GTCGACGTTT CCTACAGCTA GTTCATTTGG GAGAAAAATT TGATTCAACA AACTGCAAAA AAACATGTGA TAATTGTTCC AGCAGCAAAA GTTTGATTGA CAAAGATGTA ACTGTGATTG CAAGGCAACT GGTGGAACTG GTTAAGCTAA CAGGAGAAAG GTTTTCGTCA GCTCATATTG TAGAAATCTA CAGGGGATCC TTAAACCAGT CGGTCAAGAG AAACAGACAA GAGACTTTGC ACCTCCACGG AGCAGGAAAG CATTTAGCTA AAAGTGAAGC CTCTCGTATT TTGCACTATC TTGTGACAGA GGATATTCTC GCAGAGGGTG TTAGAAAAAG TGATCTGTAT GGATCTGTAT CGTCGTTGCT GAAGGTGAAT AGATCAAAGG CCGCCTCGCT CTTATCTGGA GGCCAGAGTA TAACGATGAG GTTTCCTTCG ACCATAAAAG CGTCAAAGCC GAGCAAATCC ACAGCAAAAG TTCCACTAAA GCAAACTACT CTTCCAATGG CAAAAGCTGC CCCACAAGAT TCGAATCTCC CCCACATTTT GTTGACAGCC TTGAAAAAGC TTCGTTCTGA TATTGTCAAA GAATCCTCAG ATGGAGTCAT GGCATATCAT ATATTCGGCA ATGCGACGCT TGAACAGATA AGTAAACGAC TTCCCAGAAC CAAAGAGGAA CTCCTTGATA TCAATGGTCT AGGAAAAGCC AAGGTGAGCA AATACGGAGA TCGGTTATTG GAAACCATAT ATTCAACCAT CAACGACCAC TACAAAACCG GTCCCGGTTC AGGGAAGAGG AGAAGAGACG AGAACATTTG CCCGAATGTA GCAGACGATG ATGATCCCGA CTGGACTGCG AGTCAGTCCC ACAAAAAGGC AGTGAAGAAC AAAAAGTAA 
Length3519
Protein Sequence
Protein Residue
Map Locationscaffold_2: 2642273.. 2649798
Download Sequence
A.thaliana
AGI-codeAT1G60930.1
DescriptionRECQ helicase L4B
TAIR curator summaryAtRECQ4B mutant showed no sensitivity to DNA damaging agents.Involved in homologous recombination.
Alias[ATRECQ4B][RECQ4B][RECQL4B][RECQ helicase L4B][RECQ HELICASE L4B]
Gene coexpression
MR
MR Locus Description
23.5584 Ahg941731 NAC domain containing protein 89
55.1634 Ahg912504
70.3136 Ahg903023
91.3893 Ahg938231 AP2/B3-like transcriptional factor family protein
91.444 Ahg479135 Nodulin MtN3 family protein
97.8213 Ahg318409 pleiotropic drug resistance 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression