Detail



ID : Ahg907619

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|907619|Al_scaffold_0002_700
Sequence
ATGGAAGCGA AGGTAACAGT GACAGATCGT ACCGACGACG ACGAGTGTTT GATCTTGGCG AGTGATGGAC TATGGAACGT TGTACCAAAT GAGACGGCGT TATGGTACAA CGTTGTGCTG TGCCCTCGAG GTGCTGGTAG AGCGGATTGT GATGATTCTG TTGCAGCAGC CGTAGACAAT GCTTGCTCTG ATGCTTCTTT GCTATTAACG AAGTTTGCTC TAGCAAGACC AAGCTTTGAT AACGTGAGCG TTGTGGTGCA GTGGTTGACA GGAGGAAGAG GAGGAATAAT CAATCATCGT CTTAATAATT AG 
Length312
Protein Sequence
Protein Residue
Map Locationscaffold_2: 4181839.. 4182150
Download Sequence
A.thaliana
AGI-codeAT3G11410.1
Descriptionprotein phosphatase 2CA
TAIR curator summaryEncodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.
Alias[AHG3][ATPP2CA][PP2CA][ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA][protein phosphatase 2CA]
Gene coexpression
MR
MR Locus Description
13.4164 Ahg357627 Protein of unknown function (DUF295)
14.9666 Ahg924092
26.7395 Ahg484375 Anther-specific protein agp1-like
30.7409 Ahg935938
34.3366 Ahg352898 glycosyl hydrolase 9B17
36.5513 Ahg354881 transcription factor-related
45.6727 Ahg479712 Domain of unknown function (DUF26)
50.8232 Ahg892791 GDSL-like Lipase/Acylhydrolase superfamily protein
51.9615 Ahg943337 Metallo-hydrolase/oxidoreductase superfamily protein
53.479 Ahg934807
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression