Detail



ID : Ahg907872

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|907872|Al_scaffold_0002_953
Sequence
ATGAGTTGGC GATCAGAATC TATATGGATA GAATTTATAA CGGGGTCTCG AAAAACAAGT AATTTCTGCT GGGCCTTTAT CCTATTTTTA GGTTCATTAG GATTCTTATT GGTTGGAACT TCCAGTTATC TTGGTAGAAA TGTTATATCG TTATTTCCGT CCCAGCAAAT CATTTTTTTT CCACAAGGGA TTGTGATGTC TTTCTATGGG ATCGCAGGTC TCTTTATTAG TTGCTATTTG TGGTGCACTA TTTTGTGGAA TGTGGGTAGT GGTTATGATC TTTTCGACCG AAAAGAAGGA ATAGTGCGTA TTTTTCGTTG GGGATTTCCT GGAAAAAGTC GTCGCATCTT TTTACGATTC TTTATGAAAG ATATTCAGTC CATCAGAATA GAAGTTAAAG AGGGTGTTTC TGCTCGACGT GTCCTTTATA TGGAAATTCG AGGTCAAGGG GCTATTCCTT TAATTCGTAC TGATGAGAAT TTTACTACAC GAGAAATTGA GCAAAAAGCT GCTGAATTGG CTTACTTCTT GCGTGTACCA ATTGAATAG 
Length549
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8201565.. 8202110
Download Sequence
A.thaliana
AGI-codeATCG00520.1
Descriptionunfolded protein binding
TAIR curator summaryEncodes a protein required for photosystem I assembly and stability. In cyanobacteria, loss of function mutation in this gene increases PSII/PSI ratio without any influence on photoautotrophic growth.
Alias[YCF4]
Gene coexpression
MR
MR Locus Description
5.2915 Ahg907865 photosystem II reaction center protein B
6.78233 Ahg475560 photosynthetic electron transfer A
7.74597 Ahg952681 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6
8.12404 Ahg475584 ATP synthase subunit alpha
10 Ahg925488 ATPase, F0 complex, subunit A protein
11.225 Ahg475579 ribosomal protein S2
12.9615 Ahg925485 DNA-directed RNA polymerase family protein
12.9615 Ahg925489 ATP synthase subunit C family protein
13.8564 Ahg315521 Photosystem I, PsaA/PsaB protein
14.4222 Ahg497133 iron-sulfur cluster binding;electron carriers;4 iron, 4 sulfur cluster binding
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression