Detail



ID : Ahg907996

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|907996|Al_scaffold_0002_1077
Sequence
ATGTCATTCC GCTGTGTTCG TACCGTGTCC GGGTTTCGCA GCTTATCTTG CGCTCTTCCT GGATTCCTTC TTCTTCGCGG CAATGTAGCC CCGAAGACGG CAATTTTCGC CAGTCCATCT TCTAATATCC GTTTCTTTTC TTCTGATACT GCACCAATGG ATTTTGAAGA GAATAAGTCG AAGTCAGTGC TGAAGAACTT CCCGGTCTTT AGCATCTTTC AAGATTGGAA GAATAAGTTT CTGCCAGTGA AAGAAGTATC TAGTGATGAT GCAGCAGAAA ATATGACTAC TTCTGCCATT GATTTGGCCC TCAACTCGGT GGTGAAGGTG TTCATCGTCT CTAGCAAGCA TAGAATTTTT CAACCTTGGC AGATTAGTAT GCAGAGTGAA TGCACCGGCT CTGGTTTTGT AATCTCGGGA AAGAGGATTC TTACGAATGC TCATGTAGTA GCTGATCAAA CATCTGTTAA AGTCCGAAAG CATGGTTCAC CCAAAAAGTA CAAAGCAAAA GTTCAAGTGG TTGGTCACGA ATGTGATTTG GCCATCTTGG AGATCGATAA CGAAGAGTTT TGGGAGGGTC TTACCCATTT GGAGCTGGGA GACATACCCT CCCAAATGGA TTCTGTGGCG GTCGTTGGCT ATCCAGAAGG TGGTGATAGT ATATCCGTTA CGCAAGGTGT TGTGTCGAGA GTTGTACTGA GAAGATACAG TCACAGCTCC ACCGAGTTAT TGAAAATACA AATAGATGCA GCTATAAACT CTGGAAATAG TGGCGGTCCG GTAATCATGG GAAACAAAGT GGTTGGTGTA GCATTTGAAA GCCGTTGCTG TTCTGAACTT ATAGGCTACA TAATTCCAAC TCCAGTCATT AGACATTTTT TAAATGGTGT TGAAGAAAGT GGTCAACATT TTAGTTTCTG CTCAATGAAT TTATCATATC TAACTATGGA GCATGCCCAC ACCCGTAACG CCTTAAAGAT GGGCAAGGAA ATGACAGGGA TTGCTGTAAA AAGTATAAAC CCACTTTCGG ATGCTCACAA AGTTCTGAAA AAAGATGATG AAATTATAGT ACAGGACCGA GTAAGTTTCA AGCATTTGGT TTCTATGAAG AAACCATGTG ATACAGCGTC ATTTAAAGTC TTAAGAGAAG GGAAAGAACA CGAGTTCAAT ATAAGCCTAA AACCCGTGCA ACCTCTAGTT CCAGTGAATC AATATGACAT GCCTCCAAGT TATTATATAT ATGGGGGTCT TGTTTTTGTA CCTCTAACTC AACCATACAT TGATCGTTCT TATATTTGCG AATGTTGTGT TAAAAAGATG CCCACAAAAG CCGGTGAACA AATTGTAATA ATTTCTCAGA TTTTAGAGGA TGATATCACT TCAGGTCTCA GTATTTTTGA AGATTTACAG GTGAAGAAAT TGAATGGAGT GGAAGTGGAT AATTTGAAGC ATCTATGTCA GCTTATAGAG GAATGTTCCA ACGAGTATTT GAGGTTTGAC TTGGAAGACA ATAATTTTTT TTTCCTAGAA CATAAATCTG CGAAAAAAGC CACTTGTAAG ATCTTGAAAA GTCTCAAAAT ACCATCGGCC ATGTCTGAGG ACCTTCAGCC TAAACAACGG AATAACCGCC GCAAAGTTCC TCGGCAGAGC AAAAAACATT GA 
Length1662
Protein Sequence
Protein Residue
Map Locationscaffold_2: 9260610.. 9262697
Download Sequence
A.thaliana
AGI-codeAT1G65630.1
DescriptionDegP protease 3
TAIR curator summaryEncodes a putative DegP protease.
Alias[DEG3][DegP3][degradation of periplasmic proteins 3][DegP protease 3]
Gene coexpression
MR
MR Locus Description
3.60555 Ahg934567
8.83176 Ahg915183 F-box family protein with a domain of unknown function (DUF295)
13.1909 Ahg901700
13.8564 Virus1395
14.0712 Ahg324316 TRAF-like superfamily protein
14.6969 Ahg924078 prenylated RAB acceptor 1.G1
15.9687 Ahg907803
17.7482 Ahg939832 Plant self-incompatibility protein S1 family
21.6795 Ahg938156
21.9089 Ahg891189
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression