Detail



ID : Ahg908162

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|908162|Al_scaffold_0002_1243
Sequence
ATGATACTAC GTCGTTTCAT CTGCTACAAC GCTTCTTCAA CTGTTTCATC TATAGCTCCG TCTCCGAAGA AGAAGCCTCT CATCTTCTTA GGCTCTCCTC AGGTCTCCGT GACTGTGCTT GAAGCTCTTT TCAATGCATC TGCTGCACCA AACTCTTCCT TTGAGGTTGC AGGCATTGTT ACACAGCCTC CATCAAGGAG AGATCGGGGT AGAAAAGTGT TGCCTTCGCC TGTAGCGCAA TACGCTCTTG ATAAAGGCTT ACCTTCTGAT CTCATTTTCT CCCCGGAGAA GGCAGGAGAT GAAGCATTCT TATCGGCTTT ACGAGAGTTG CAACCTGAGC TTTGTATTAC AGCAGCTTAT GGGAATATAT TGCCTACTAA GTTCCTTAAA ATTCCATTAC ATGGGACAGT GAACATACAC CCAAGTTTGT TGCCCCTGTA CCGTGGTGCA GCTCCAGTTC AAAGAGCATT ACAGGATGGT GTCCCGGAAA CAGGAGTATC ATTAGCATTT ACCGTGCGAA AGTTAGATGC AGGGCCAGTG ATTGCCTCTA AGAGGTTCCA AGTGGATGAT CTAATAAAGG CACCAGAACT GCTCTCGTTC CTATTTTCTG AAGGTTCAAA GCTTCTTATC CGTGAACTTC CCTCAATATT TGATGGGTCT GCAAAATCAA AAGCAGCTCC CCAAGATGAT TCTAAAGCTA CCTTAGCTCC AAAGATAGCT CCAGATGAGG CTTGGCTCTC TTTTGACGAG GAAGCTTTTG TTCTACATAA CAAGGTTCGT GCATTTGCAG GATGGCCGGG AACAAGAGCT AAAGTTGTAG TCCTCGATGA TAAAAGCGGT CAGCAAAATG TACTAGAGCT TAAAATCATG TCCACTCGAG TATGCAAAGA TCTGGAAATC CAGGATGGTG GACAAGATTA TGTAACTTTC AAGAAAGGTT CATTGGTGTT TCCCTGTGGA GGAGGTACTG CTTTAGAGGT ACTAGAAGTC CAGCTTCCTG GTAAAAAAGC TATCAACGCG GCCGCCTTTT GTAAACATTT TGACCCTACA TTTGTTGTAA ACTTGTAA 
Length1068
Protein Sequence
Protein Residue
Map Locationscaffold_2: 10817124.. 10819401
Download Sequence
A.thaliana
AGI-codeAT1G66520.1
Descriptionformyltransferase, putative
TAIR curator summary
Alias[pde194][pigment defective 194]
Gene coexpression
MR
MR Locus Description
24.2693 Ahg473481 plastid ribosomal protein l11
28.2843 Ahg937638 glutamate-1-semialdehyde 2,1-aminomutase 2
47.3709 Ahg488753 NAD(P)-binding Rossmann-fold superfamily protein
49.1427 Ahg470751 ribosomal protein L4
52.8015 Ahg474279 ATP synthase epsilon chain, mitochondrial
58.3781 Ahg945288 pfkB-like carbohydrate kinase family protein
58.7878 Ahg928039 Ribose 5-phosphate isomerase, type A protein
60.597 Ahg481233 other RNA
67.6092 Ahg951366 Ribosomal L29 family protein
70.4982 Ahg482332 Ribosomal protein S5 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression