Detail



ID : Ahg909563

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|909563|Al_scaffold_0002_2644
Sequence
ATGGCCAAGA AAGCTTTACT GATTGGGATC AACTACGTGG GAACCAAGGC AGAGCTACGA GGCTGCGTCA ACGATGTCCG TCGGATGCGT ATAACCCTCG TTGAACGGTA CGGATTCTCC GAGACGAACA TCAAAATGTT GATTGATACT GATAGTACTT CGATCAAACC GACCGGTAAG AACATCAGAC AGGCGTTGTT GGATCTCGTT GAACCGGCTA AACCGGGTGA CGTTCTCTTC GTCCATTACA GTGGACACGG GACTAGGTTA CCCGCTGAAA CTGGAGAAGA CGATGATACT GGTTACGATG AGTGTATTGT TCCTTCCGAT ATGAATCTCA TCACCGATGA TGATTTCAGG GATCTTGTAG ATATGGTGCC AAAGGATTGT CCCATTACAA TCATCTCTGA CTCTTGTCAC AGTGGTGGTC TCATAGATGA AGCCAAAGAG CAGATAGGAG AGAGCACGAA GAAGAAGAAA GACTATGGAG ACTCTTCAGC GATCAACAAG GAGACAGAAG CAGAGATAAT TGAAGTGGGA AAAAGGTCTC TGCCATTGGA TACTTTGATT GATATGCTGA AGCAAGAGAC GGGCAACGAT GATATCGAAG TGGGGAAAAT CAGGACAACC CTTTTCGATA TGTTTGGAGA AGATTCAAGT CCAAAGGTGA AGAAGTTCAT GAATGTGATT CTAAGCAACC TACAAGAGAC TACTACTGCA ATTGAGAGTT TAGCTCAAGA GTTTCTTGAG CAGAAGCTTA ACGACGATGT GAAACCCACG ATCCAAGAGG TGTATGCAGG TGCTATCAAT GGTGCACTTC CTGATAACGG TATACTGATC AGTGGTTGCC AAACTGATCA AACTTCTGCA GACGCAAGCC CACCGGGTCA CCCGGAATTG GCTTATGGAG CACTAACCAA TGCTATACAG ATTATAATTG GGGAAACTAA AGGTAAGATT AGTAACAAAG ATCTTGTTTT GAAGGCTAGG AAGCTTCTTA AGAAACAGGG CTTTGATCAA CGACCGGGAC TGTATTGCAA TGATACTTAT GTCAATGCTC AGTTTATATG TTGA 
Length1074
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17547627.. 17548972
Download Sequence
A.thaliana
AGI-codeAT1G79320.1
Descriptionmetacaspase 6
TAIR curator summary
Alias[AtMC6][AtMCP2c][MC6][MCP2c][metacaspase 6][metacaspase 2c]
Gene coexpression
MR
MR Locus Description
12.4097 Virus0459
12.4097 Ahg497240
15.9374 Ahg897270 cation/H+ exchanger 12
19.2873 Ahg936204
21.7256 Ahg337923
26.7208 Ahg916419
26.7208 Ahg906232
37.2156 Ahg343928
37.6962 Ahg950132 F-box family protein
42.6849 Ahg330465 myb domain protein 100
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression