Detail



ID : Ahg909593

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|909593|Al_scaffold_0002_2674
Sequence
ATGAAGGTGC TGATGAACGA TCTTTGTCTG CTTCTTAAAC AAGAGAGGTT TGATGATAGA GACTTAGTCA TGCTCTTAAC TAGTAATCAA AGAGAAGAAA TTAAAATAGA GAGATGTTTG AAGCGAAAAA TGCAGATTGG TGATGACGAC AATGAAAGAT ATAAGATGGA TGAGGGAAGA AACGAACCTT GGAGGCCGGA AACTATTGCT TCTGTTAGAG GCAAGAGGTA G 
Length231
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17671135.. 17671420
Download Sequence
A.thaliana
AGI-codeAT1G79580.1
DescriptionNAC (No Apical Meristem) domain transcriptional regulator superfamily protein
TAIR curator summaryNAC-domain protein. Involved in root cap development. Involved in a regulatory feedback loop with FEZ. FEZ activates SMB in hte root cap daughter cells soon after division, and SMB in turn represses FEZ expression in these cells, thereby preventing further stem cell divisions.
Alias[ANAC033][SMB][URP7][Arabidopsis NAC domain containing protein 33][SOMBRERO][UAS-TAGGED ROOT PATTERNING7]
Gene coexpression
MR
MR Locus Description
2 Ahg323850 D-galactoside/L-rhamnose binding SUEL lectin protein
2.23607 Ahg943199 ISCU-like 3
2.44949 Ahg341444 RING/U-box superfamily protein
2.64575 Ahg344413
2.64575 Ahg947386
3.16228 Ahg931499
3.60555 Ahg929683
3.74166 Ahg928121
4.12311 Ahg924533
4.58258 Ahg946870 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression