| Annotation |
|---|
| Description | jgi|Araly1|909750|Al_scaffold_0001_4 |
| Sequence |
GCCGTGATCT GTGGTATTTC GTATCGTTTC TCTCGCCACG AGCTCAAAGG CTGCATCAAC GACGCCAAGT GCATGCGCCA CCTTCTCATC AACAAATTCA AATTCTCCCC AGATTCAATT CTCATGCTTA CCGAAGAAAC TGATCCATAT CGTATCCCGA CCAAGCAAAA TATGAGAATG GCATTGTATT GGCTCGTACA GGGATGCACT GCAGGCGACT CCCTTGTCTT CCACTACTCT GGTCATGGTT CTCGTCAAAG AAACTACAAC GGTGATGAAG TTGATGGCTA TGATGAAACA CTCTGTCCTC TGGATTTTGA AACTCAGGGG ATGATTGTAG ACGATGAGAT CAACGCAACC ATTGTACGCC CTCTTCCACA TGGTGTCAAG CTCCATTCAA TTATCGATGC TTGCCATAGT GGCACCGTGC TTGATTTACC GTTCCTATGC AGAATGAACA GGTTACTAGT CCCTCAACTG CTGCTAAAAG GGGCTGGGCA GTATGTGTGG GAGGATCATC GGCCTAGGTC TGGTTTGTGG AAAGGAACAG CTGGTGGAGA AGCCATATCA ATCAGTGGAT GTGATGATGA TCAGACTTCG GCCGACACAT CAGTAAGTAG AACGAGTCTA ATCATACGTC TTGCTGTTGT AGCGCTGTCA AAGATCACGT CTACGGGTGC TATGACGTTC TGTTTTATTC AAGCAATTGA ACGCAGCGCA CAAGGCACGA CCTATGGAAG CCTTTTGAAT TCAATGCGCA CCACAATAAG GAATACAGGG AATGAGGGTG GTGGTATTGG TGGTAGTGGT GGAGTTGTGA CGACTGTGCT GAGCATGCTT CTGACAGGGG GAAGTGCGAT TGGGGGATTA AGACAGGAGC CTCAACTGAC TGCTTGTCAA CCATTCGATG TCTATGCAAA GCCTTTCACT CTCTAG |
| Length | 936 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 8143.. 9433 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G02170.1 |
| Description | metacaspase 1 |
| TAIR curator summary | Metacaspase AtMCP1b. Arginine/lysine-specific cysteine protease activity. Induces apoptosis in yeast. Contains Pfam profile PF00656: ICE-like protease (caspase) p20 domain |
| Alias | [ATMC1][AtMCP1b][ATMCPB1][LOL3][MC1][MCP1b][ARABIDOPSIS THALIANA METACASPASE 1][metacaspase 1b][ARABIDOPSIS THALIANA METACASPASE 1B][LSD ONE LIKE 3][metacaspase 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.40312 |
Ahg939889 | calcium dependent protein kinase 1 |
| 10.198 |
Ahg311931 | vamp/synaptobrevin-associated protein 27-2 |
| 10.3923 |
Ahg485174 | B12D protein |
| 16.5831 |
Ahg481186 | RING/U-box superfamily protein with ARM repeat domain |
| 18.4932 |
Ahg482227 | Protein kinase superfamily protein |
| 22.8035 |
Ahg474065 | actin 8 |
| 37.9473 |
Ahg484456 | auxin signaling F-box 2 |
| 47.4342 |
Ahg924051 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 48.7852 |
Ahg471910 | cationic amino acid transporter 8 |
| 55.9911 |
Ahg496906 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|