Detail



ID : Ahg911565

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|911565|Al_scaffold_0001_1819
Sequence
ATGGAAGTGG ATCATGGGCG AGTTGTTGCT ACGGCGATTT TCCTGAATGA TGAGGTTCCC ACAACAGAAG TCCTTATTAC TACAAGTCAT GATAATGTAG CAAGAGGAAG GAGGAGGAGT GTCTATGAGC TAGAGTGTAT ACCTCTTTGG GGCACAGTGT CAATCTGCGG TGAAAGGTCT GAAATGGAGG ATGCTGTTAG AGCATTACCT CATTTTCTCA AAATACCTAT CAGAATGCTT ATGGGGGATC ATGAAGGGAT TACTCCAACC GTCACATGTC TTACTAGTCA CTTCTTCGGT GTATATGATG GCCACAGAGG CACTCAGGTT GCTGACTATT GCCATGCTAG AATCCATTTT GCTTTGGTTG AACGGATAAA AGAGGAATTG TGCAAGAGGA ACACTGGTGA GTATAGTAGG CAGGTCCAGT GGGAGAAAGT CTTTGTAGAT TGTTACCTAA AGGTCGATGA TGAGGTCAAA GGGAGAATCA GGAGACCTGT TTCTGGTTCT GGTTCTTCTG ATAGGATGGT TCTTCAGGCT GTTTCCCCTG AGACCGTAGG ATCAACTGCT GTGGTTGCTT TGGTTTGCTC ATCACATATC ATAGTTTCCA ACTGTGGTGA TTCAAGAGTG GTTTTACTCC GCGGCAAAGA ATCCATGCCT TTATCCGTTG ATCACAAACC TGATAGAGAG GATGAGTATG CAAGAATAGA GAAAGCTGGA GGAAAAGTTA TACAATGGCA AGGCGCTCGT GTTTCTGGCG TTCTCGCAAT GTCTAGGTCC ATCGGTGATG AATACCTGGA GCCATATGTA ATACCAGTTC CTGAAGTGAC GTTTATGCCA CGAGCTAGAG AAGACGAGTG TCTTATATTG GCCAGTGATG GACTTTGGGA CGTAATGAGT AACCAAGAAG CTTGCGAGTT AGCTAGGAAA CGGATCTTGA TGTGGCACAA GAAGAACGGA TCTTTGCCTT TAGCCGAGAG AGGTGTAGGG GAAGACCATG CGTGTCAAGC CGCGGCTGCT TATCTCTCGA AACTCGCTCT TCGAAAGGGA AGCAAAGACA ATGTCTCGAT CATAGTGGTC GACTTGAAAG CTCAGAGAAA GTTCAAGACC AGATCTTGA 
Length1119
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7015957.. 7017489
Download Sequence
A.thaliana
AGI-codeAT1G17550.1
Descriptionhomology to ABI2
TAIR curator summaryProtein Phosphatase 2C
Alias[AtHAB2][HAB2][homology to ABI2]
Gene coexpression
MR
MR Locus Description
9.38083 Ahg351608 Protein of Unknown Function (DUF239)
14.4222 Ahg945592
21.9089 Ahg316947 Pectin lyase-like superfamily protein
25.2982 Ahg925744
27.0185 Ahg477013 Terpenoid cyclases family protein
36.8646 Ahg936150 F-box family protein
37.9473 Ahg359364
39.2938 Ahg342636 AP2/B3-like transcriptional factor family protein
42.9418 Ahg916513
47.4025 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression