Detail


ID : Ahg912628

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|912628|Al_scaffold_0001_2882
Sequence
ATGGTATCAT CTGTCCCATT TGTTTATCGG AATATGCTAG CAAAGAGACT GTACGGTGCA TACCAGAATG TGATCACTGT TTCCACGTTG AATCATCGTA TCACGGATGC TCTCCATCGG AATGCACAAA TCATTCCAGT GCTAGAGCAA TGGCGGCAGC AGGGTAATCA AGTGAACCCT TCGCACGTGA GAGTCATCAT CAAAAAGCTT CGTGATTCTG ACCAATCTCT CCAAGCCCTT CAGGTATCAG AGTGGATGAG TAAAGAAAAG ATTTGCAATC TAATTCCAGA AGATTTTGCA GCTCGGCTTC ATCTTATAGA GAATGTTGTA GGTTTAGAAG AAGCAGAGAA GTTCTTCGAA AGTATTCCAA AGAACGCAAG AGACGATTCT GTTTACACCA CTCTCTTAAA CTGGTATGCA AGATCAGACA AAACTCTGTG TAAAGCCGAA GCCACGTTCC AGAAGATGAG GGAGTTAGGT CTCCTCTCGA GACCTTCTCC TTACAACGCA ATGATGTCTC TCTACATTGC ACTAAATGAT CGAGAAAAAG TGGAAGAGCT TTTGCGTGAG ATGAAAGATA ATGACGTGGA GGCCGATAGT ATCACAGTAA ACAACGTGTT GAAGCTATAC TCGGCTGTGT GTGACGTGAC CGCGATGGAG AAGTTTTTGA ATAAGTGGGA AGGGATTAAT GGGATCAAAC TTGAGTGGCT TACGACTCTT GACATGGCAA AGGCTTACCT GCGAGCCCGT TCAAATGGAA AGGCTATCAA AATGCTGCGT TTAACAGAGG AATTGGCGGA TCGTAAGTCG CTAAAATCAG CTTACGACCA TCTCATGAAG CTGTATGGTG AAGCTGGAAA CAGAGAAGAG GTTGTACGTA TATGGAACCT TTACAAGATG AACATAGGAC AACGTGATAA CAAGGGTTAC CGAACTGTGA TCCGTTCTCT CTTGAAGGTA GACGATATTT TTGGGGCAGA AGAGATATAC AAAGTGTGGG AATCGTTGTC ACTTGAGTTT GATATCCGAA TCCCGACTAT GTTGGCCTCT GGTTATCGAG AGAGAGGAAT GACAGAGAAG GCTGAGAAAC TCATAAACAG TAAAACCATT AAGGACAGAA AAATGAATAA GCCCGTCACT CCGCTTTTGG AGCAATGGGG AGATCAAATG AAACCGTCTG ATCTTAAATG CCTTATCAAG AATCTCCGTG ATTCCAATCA GTTTTCTAAA GCACTTCAGG TTTCCGAATG GATGGGTGAA AAACGGGTTT GTGATCTTTA TTCGGAAGAT TATGCAGCTA GGCTTTACCT GACTGAGAAT GTGTTGGGTT TGGAAAAAGC AGAGAAGTAC TTTGAAAACA TCCCTGAGAA CATGAAGGAT TACTCTGTCT ACGTAGCTCT CTTAAGCTCT TACGCGAAAT CTGACAAAAA TTTGGAAAAT ATGGTGGAGG AGATTCTTCG TGAGATGGAG GAGAACAACG TGGATCCTGA TAGTATCACG GTGAACTATG TTTTAAAGGT ATACGCGGCT GCATCAAAGG TAGAAGCAAT GGAAATGTTT ATGAGACATT GGGCGGTAGA GATGTATGGT AATGTGGCAG GTTGTAAAAG AGAGGTGCAC AATCTTTGGG AAGAATGTAA GAATAAGAAG GAAGAAAAAG TGGGGGATGG TAAGGAATGT TTAAATGTGG TTAGCACTTT GTTGAAGATG GACGATGATG GATATCGAAC TGTGATTAGC TCTTTGTTGA AGCTGGATGA TGTACAAGGA GCAGAGAAGG TATATGGAGA GTGGAAACCG AAGGGACCGA AAGAAGGGAA TGCATTGAAG GTTGGGGAAA TGTTAAAGTC GATTAGTAAG AAGAGGAATG TGATGCATTT AAGGATGTTG AAGGAATTTG TAGTCAGCGT CTTGATATGT GTTGCCGTTT TTGTGGGCGT CTTATGTTTA CTGCTCCTAG ACTATTGGGC CTGCCCATAC CGATATCACC GCTACTACTA CTAA
Length2004
Protein Sequence
Protein Residue
Map Locationscaffold_1: 11680958.. 11691253
Download Sequence
A.thaliana
AGI-codeAT1G28020.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Ahg907912 Zinc finger, C3HC4 type (RING finger) family protein
3.60555 Ahg915726
4.89898 Ahg333046 EF hand calcium-binding protein family
5.47723 Ahg924826
12.2474 Ahg472768 F-box associated ubiquitination effector family protein
13.7113 Ahg923785
16.5227 Ahg944900
18.7617 Ahg924403
20.567 Ahg922193 F-box family protein
22.5832 Ahg908717 MATE efflux family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression