Detail



ID : Ahg912704

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|912704|Al_scaffold_0001_2958
Sequence
ATGGCAAGTC TTACTCTGTT TCTGTCTTTT CTTTCTCTAG CTTTAGTCTC GGCTGTGAAT TGTCGTGTTT TAAGTTCTGT GTCTGAGTAT AACAACTCGG TCTTGGTCTC CGACGGAATC CAAGACAGAG CCAGCAACGA GTTTCTCAGT CTTGATCCGC CAAATCGCAT CTCCAAGAGT GCTTGTGTTC ATGTCTACGG GTTTCTTCCC TGTGCAGATA ATATTGGAGG TTATGTCTTC CAAGTTTTCT CCTTTTGTTG TCTATTGATA ATCGGTGAAT ACTTTTTGTC TAAAGGAAGG TCTAAGCTCT TTGTCATCTT CGAGGTCGGT TTCTTTGGTG GAATCATCTT CCCTCTCCTT ACAATGTTCC CAAGAATCGC CCTTATTCTA TCGACTGGAC TGATAGGAAG CAGCGATATC GCAAACTCGA TGGTGGGTAA TAACGTTGCA GTTACCGTGG GATACTCTGT CTTTGCTTTG ACAATGCAAT GGGGAGCTTG TGTTGTCTTT GGCTTGTCTG GTGTGAGAGA AGATCACTCC TTAACTTCTG ACACAACGAG TCCAAGACGA CAAGTTAAGA TGAGCAATCT ACTGAAGAAC CTTGCTGGAG CTAGCGTAAA AGCAGATCCT AAGAACAAGA AAGCGGCAGG GATTATGCTC CTAACTTTAT TGCCTTTCGT CTTGGTCACA TTTTCAGAGA CATTTCACTC AAAATCTTGG GATGACAATA TGGTTTTGAT CACACTCATA TTCTCTGGTT CTGCAACTGT TCTCTACTTT GTTTATTTGT ATTTTGATAA AGCGGACCAA GTGAAGAGCC TAGAACACGC GAGGTTTGAG CTCATGTCAG AAGTTCATAA GCACTTGCAG AATTTTTCGC CTCAAAGTCT TATAAGAAAT GGACAACTAA GTCGAGAGAG CTTGAAAAGT TTGTTCAAAA AATTCGATGT CAACAAAGAC GGAAAGATCC AAGTTTCAGA GTTAAAAGAT CTGACGGTGG ACTTTGGGGT GTTAGGGAGA GTGAAGTGTG ATATAAATGA GCTTGCCACT TCATTGCTTG CAGATTTCGA CAGTAATAGA GATGGTGAGA TAGATGAGAC TGAATTCACG ATTGGTATCG AAAAATGGCT GAAACAGTAC AAATTCGGCT TCGATAGCAC CGAGTCACCA AGAGAGGACA GAGCTGAGGA TGATGGAGTT TTGAAGGTGG AACAACTAAG GGGATGTCTT TTTACTAAGT TGCTTACAAA GAGAACCTTG AAAGCTGTCA TAGAAGTCAC TATAGGGATT ACAATTGTCA GCTTTCTTGC AATGCCTTTC ATGATGAATA TCGAACTTTT GTCGGTATCA GCTGGAATTC CTTCCTTCTA TGTTGTCTTT GCAGTGATCC CTTTGGCAAG AAACCTAAAG AACGCTTTGT CTGCTCACTT CTGTCGCAAG AAAGACAAAG CGAGAATCAC ATCTGACACT TTTTCTGAGA TATACAGAGA TGTTACATTG AATAATCTGT TGGGGACAAC AATTATATTG GCGATTGTGT ACATTAGAGG ATTGACTTGG GATTACTCAA CAGAAGTTCT CATTATTGTG ATCGTTGGTC TCTTAATAGT TTTGATCTCT GGTGTGAACT GTCGCGTTTT AAGTTCTTTA TCTGAGAAAA ACTCGATCTT GATCTCCGAT GGAGTTCAAG ACGGGTCCAG CTACGAGTTT CTGAGTCTTG ATCCGCGAAA TGGCAGCATT ACCAAGAATC AATGCATACA TGTCTACGGG TTTCTTCCAT GTGCAGACAA TGTTGAAGGT TATATCTTCC AAGTTTTCTC GTTTGGTTGC CTCTTGATAA TCGGTGAATA CTTCTTGACT AAAGGAAGGT CTAACCTCTT TCTCATCTTC GAGGTGGGTT TTTATGGCGG AATCATCTTC CCTCTCCTTA CGATGTTTCC AAGAATCGCG CTTATTCTCT CGACTGGACT GGTGGGAAGC CGCGAAATGG CAAGCTCGAG GGTGGGTAAT ATCATTGGAG TTACTGTGGG ATACTCTGTC TTTGCTTTGA CAATGCAATG GGGAGCTTGT ATTCTCTTTG GCTTGTCTGG TTCTAAACCA GAACAGCCCA TAGAATCTGG AGAAAATTCA GACGTAAATT GCCCAAGAAC ACAAGTTTAC TGGAAAAATC TATTAAATTA CGTTTTCGGT TTTCTCTTTG TCAAAAACTC GCAGTATTTT GATAGAGCCG ACCAAGAGAA GAGCTTAGAT CTCGCGAGGT TTGAGCTCAT GTCAGAATTT CATAAGCATT TACAGATTTT TTCCCCCAAA AGCCTTATAA GAGATGGACA ACTAAATGAA GAGAGCTTGA AAAGGTTGTC TGACAGAATC GATGTAAACA AAGATGGAAA GATCCAAGTT TCAGAGTTGA AAGATCTTAC GGTGGAGTTT GGGATGTTAG GGAGAGTCAA GTGTCACATA GATAAGCTTG TCACTACATT GGTTGCCGAT TTCGACAGGG ATGGAGATGG TGAGATAAAT GAAGCTGAAT TCAAAATTGG GATTAAAAAA TGGCTGAATC AGTACAAATT CAGCTTCGAT AGCACCGTGC CACCAAGTGA GGACCAAGCT GAGGAGAATC CAATATTGAA GATAGAAAAG CCAAAGGAAA GTCTTGCTAC TAAGCTGGTC TCATGGAAAA CCTTGAGAGC TGCCTTGGAA GTCACTTTAG GGATTCTAAT TGTCCTCTAT CTTGCAAGAC CTTTCATGAT GAACATCCAG CTTTTGTCGG AATCAGCTGG AGTTCCTTCC TTCTATGTTG TCTTTGTAGC CATTCCTTTG GCAAGAAACC TAAAGAGCAC CTTGTCAGCT CACTTCTGTC GCAAGAAAGA CAAAGCAAGA ATCACATCTG ACACATTTTC TGAGATCTAC AAAGATGTTA CAATGAACAA TCTGATGGGA GTTTCAATTA TATTGGCAAT TGTGTACGCA AGAGAATTAA TTTGGGATTA CACAACAGAA GTTCTCATTA TTGTGATCGT TGTTCTCTTA ATAGGCGTAC CGGCTTATGT GAGATCGACT TATCCATTTT GGATATGTGT CTTGGCCTTT GCTCTCTACT TCATCTCTCT TGTCGTAGTA TATTTCCATT TCATGTCTCT AGACAAGGGA AACACTTTTA CCTTTAACGA ATAA 
Length3174
Protein Sequence
Protein Residue
Map Locationscaffold_1: 12079783.. 12086222
Download Sequence
A.thaliana
AGI-codeAT1G29025.1
DescriptionCalcium-binding EF-hand family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.7178 Ahg924354 Disease resistance protein (TIR-NBS-LRR class) family
26.2679 Ahg932761
31.749 Ahg478323 Calcineurin-like metallo-phosphoesterase superfamily protein
35.1568 Ahg942461 Malectin/receptor-like protein kinase family protein
55.2268 Ahg904089 S-locus related protein SLR1, putative (S1)
63.5216 Ahg484650
67.8602 Ahg930710
71.5821 Ahg890292
74.5587 Ahg475824 glyoxal oxidase-related protein
77.9423 Ahg922940
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression