Detail


ID : Ahg913585

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|913585|Al_scaffold_0001_3839
Sequence
ATGGCGGGAG GTAAGTGGCG GTTCCTAGAA GTAGCAGTCG TAGTAATGGT GTTGCAGTGG TGGTGGGGTT ATAATGGTAA TTTAGCTGAG GGATTTCCAG TAGAAGATCT TGTGACAAAA CTGCCTGGAC AACCGGAAGT GGCATTCAGA CAATTCGCGG GTTATGTCGA TATCGATGTC AAAGCTGGTC GGAGTCTCTT TTATTACTTC GTCGAAGCCG AGAAGCAACC CCACTCTAAA CCTTTAACCC TTTGGCTCAA TGGAGGACCA GGCTGTTCTT CCATAGGAGG AGGAGCTTTT ACAGAGTTGG GTCCATTTTA CCCCATCGGA AATGGTCGTG GCCTCCGCAG AAATCCCAAA TCTTGGAACA AAGCCTCAAA TCTATTGTTT GTGGATTCAC CGGCTGGAGT AGGATGGTCT TATTCGAATA CAACTTCTGA TTACACCACT GGCGATGAAT CCACTGCCAA GGATATGCTG GTGTTCATGT TAAGATGGTT AGAAAAATTT CCACAATTCA AGACTCGAAA CCTCTTTCTC GCTGGCGAAA GCTATGCAGG ACACTACATA CCTCAATTAG CTGATGTGAT ACTTGAATAC AACCAACAAC GCACAAACAG ATTCAAGTTC AATCTCAAAG GGATTGCAAT CGGGAATCCA CTTTTGAAGC TTGACCGCGA TATTCCAGCG ATGTATGAGT TCTTCTGGTC ACACGGGATG ATATCTGATG AACTTGGCCT CACTATTATG AACCAATGCG ACTTTGAAGA TTACTCATTC ACAGGTTCGC ACAACATAAG CAAATCTTGC GAAGCCGCGG TGAGTCAAGC CGGAACCATC ATCACTCAAT ATGTCAATTA CTACGACATC CTTCTCGATA TCTGCTACCC CTCCCTCTTC GAGCAAGAGC TCAGGCTCAA GAAAATGGGT ACAAAGATGA GTTTTGGGGT GGACGTGTGC ATGAGTTATG AAGAGCAATT GTATTTAACT CTTCCTGAGG TTCAAAAGGC TCTCCATGCT AATCGAACTC AACTGCCATA TCAATGGTCT ATGTGTAGCA GCCTCTTGAA ATACAATTAC ACTGACGGGA ACACCAATAT GCTTCCAATT CTTAAGAGGA TCGTTAAGAG CAAAGTCCAT GTTTGGGTCT TCAGTGGGGA TGAAGATTCT GTAATTCCAC TTCTTGGATC AAGGACTTTG GTAAAAGAAC TTGCAGATGA TCTCAACTTC AATACCACAG TTCCCTATGG AGCTTGGTTT GACAAAGGAC AGGTTGGCGG ATGGGTAATA GAGTATGGGA ATCTAGTGAC ATTCGCAACG GTGAGAGGAG CGGCTCATAT GGTGCCTTAC TCGCAGCCTT CACGAGCTTT GCATTTGTTC ACCAGCTTTG TGCTTGGCCG GAGATTGCCA CACAAATCGC CTCCTGCTCT TCATGATTGA
Length1440
Protein Sequence
Protein Residue
Map Locationscaffold_1: 21294166.. 21297179
Download Sequence
A.thaliana
AGI-codeAT1G43780.1
Descriptionserine carboxypeptidase-like 44
TAIR curator summary
Alias[scpl44][serine carboxypeptidase-like 44]
Gene coexpression
MR
MR Locus Description
10.0995 Ahg325399 MEI2 C-terminal RRM only like 2
31.0483 Ahg895302
32.9242 Ahg319167 RHO guanyl-nucleotide exchange factor 8
41.9285 Ahg936672 Protein of unknown function (DUF1216)
42.2847 Ahg938233 plastocyanin-like domain-containing protein
53.9444 Ahg906590 Cysteine/Histidine-rich C1 domain family protein
59.397 Ahg482492 Predicted AT-hook DNA-binding family protein
61.887 Ahg933363
65.4981 Ahg326587 cation/H+ exchanger 9
65.9924 Ahg329949
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression