| Annotation |
|---|
| Description | jgi|Araly1|319167|fgenesh1_pm.C_scaffold_3002183 |
| Sequence |
ATGGTTGCAG CGTTGGAACG AAGACTAAGC GCTTCCAAAT CATTCAACTT TAAAAGTATG TTTGATTCAT CTTCGACGAA ACAACAACAA TCTCAAACCA TTGTCGTGGA GAACGGAGAT TCTCATATTG TGGAATCCAA CACGCCTGAA AGCCAAAACT CCGACAGCTT CGTAGAAAGC CCCGTAGAGA GCAGCCTTCC AATAATTTCC CCTCTTACTC GGCCAGGAAA AAGATCCGAC AGACAACAAG CAGATATGGA GATGATGAAA GACAGGTTCG CGAAATTACT TCTTGGAGAA GATATGTCCG GTGGCGGGAA AGGTGTATCT TCTGCTCTGG CCCTTTCCAA TGCTATCACA AATCTTGCTG CGTCTATATT CGGGGAACAA ACAAAGCTAC AGCCGATGCC GCAAGATAGA CAAGTGAGGT GGAAGAAAGA GATCGATTGG TTATTGTCTG TGACCGATCA CATTGTCGAG TTTGTTCCTT CTCAACAAAC GAGCAAAGAA GGAGTTTGCA CTGAGATTAT GGTGACAAGA CAAAGAGGTG ATCTTCTTAT GAACATTCCA GCTCTTCGAA AACTCGACGC CATGCTCATC GATACATTGG ACAATTTCAG AGGACACAAC GAGTTTTGGT ATGTCTCTAG AGATTCAGAA GAAGGGCAGC AGGCGAGGAA TGATCGGACA AACGACAAAT GGTGGCTACC TCCGGTTAAA GTTCCTCCCG GAGGTTTATC TGAACCAGCT CGGAGAATGC TTTACTTCCA AAAAGATTCA GTCACACAGG TTCAAAAAGC TGCAATGGCT ATCAATGCTC AAGTCCTTTC AGAAATGGCA ATACCTGAGA GCTACATCGA CTCTCTCCCT AAGAACGGAA GAGCCAGCCT CGGGGATTCG ATCTACAAGA GCATAACAGA GGAGTGGTTT GATCCGGAGC AGTTCTTATC GATGTTGGAC TTGTCGACAG AACACAAAGT GTTGGATTTG AAGAATAGGA TTGAGGCATC TGTAGTGATT TGGAAGAGGA AGCTTCACAC AAAGGACACC AAATCTTCTT GGGGCTCAGC AGTTAGCTTG GAGAAGAGAG AATTGTTCGA AGAGAGAGCA GAAACAATCT TAGTCTTGCT TAAACAAAAA TTTCCCGGTC TTCCTCAATC TTCCCTTGAC ATATCCAAGA TTCAGTTTAA CAAGGACGTT GGGCAAGCGG TGTTGGAGAG TTACTCTAGG ATACTTGAGA GCTTGGCTTA TACAGTGATG TCAAGAATAG AAGATGTTCT TTACACAGAT TCATTGGCAC TAAAGCAAAC TTTATTGGCT GAAGAAACAT CAGATGGTGG GAGAACAACC GAGACGGATT CCGAGTCAGC GGGATCTTCT AACTCGGGAG AAGAAACCGA GAAGCTTGAC CCACACTACT CCAAGACCTT GTTGGATTTT ATGGGTTGGA ATGATAATAG TTCGAAAGGC GGCGATAAAC CTACTAAATC TCCAAACATT ACGCCGAAAA AGCTCTCTTA CTTGGAGAAG TTAGAGAATT TGAACGGTTT TAGAAGTCCG AAAGATAGAC ATTGA |
| Length | 1575 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 11240088.. 11242210 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G24620.1 |
| Description | RHO guanyl-nucleotide exchange factor 8 |
| TAIR curator summary | Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. |
| Alias | [ATROPGEF8][ROPGEF8][ROP (rho of plants) guanine nucleotide exchange factor 8] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.65685 |
Ahg324045 | alpha/beta-Hydrolases superfamily protein |
| 20.4695 |
Ahg320730 | Galactose oxidase/kelch repeat superfamily protein |
| 29.1548 |
Ahg476651 | Nucleotide-diphospho-sugar transferase family protein |
| 32.9242 |
Ahg913585 | serine carboxypeptidase-like 44 |
| 51.1175 |
Ahg497512 | zinc finger protein 2 |
| 51.788 |
Ahg930390 | isopentenyltransferase 7 |
| 51.9808 |
Ahg937418 | |
| 52.6498 |
Ahg946127 | |
| 54.5527 |
Ahg915959 | pumilio 13 |
| 59.8247 |
Ahg325399 | MEI2 C-terminal RRM only like 2 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|