Detail



ID : Ahg914004

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|914004|Al_scaffold_0001_4258
Sequence
ATGGTTGGGC AGTCAAATCT TTTGAAGTCT TTGGTGTTAG TTATTGGAGC TGGAGGACTT GGTTCATCTG CCTTCCTTGT TGTATCTTGC AGCATGTGGT GTTGGATTCT ACCATTGGAA GACCTAATTT CTCCAAAACC TAAACCTGAA GTTCAACCTC AACCTCAGAC TAACGGGAAA CCAACCTGGG AACAAAGTGA ATTACCTGTT TCTCAACCAC AGGATGAGAT ACATCCACAG CCGCAGGCAC AGATACAGCC ACCACCGATT AAGAGGCCAC CAGGACGTCC TAGAAAGGAT GGAGCTTTGC CTACAGTGAA GACTGCTGCT TCTGTTTCCG GTGGTGTGGA AATTGTGAAA CGAAGAGGTA GACCTCCGAG TGGAAGAGCT GCTGGAAGAG AGAGGAAGCC TACAGTTATC TCAGCTCCGG CTTCGGTGTT CCCGTATGTT GCTAATGGTG GTGTTAGACG CCGAGGGAGG CCAAAGAGAG TTGATGCTGG TGCTTCTTCT GTTGCTCCAC CACCACAACC ACCTAACGTA GAGAGTGGAG GAGAGGAAGT TGCAGTCAAG AAACGAGGAC GAGGACGGCC TCCTAAGATC GGTGGTGTTA TTAGGAAGCC TATGAAGCCT AAGAGAAGCT TTACTCGTAC TGGTAGACCC GTAGGAAGAC CCAGAAAGAA TGCGGTGTCA GTGAGAGCTT CTGGACAACA AGATGGTGAC TATGGAGAGC TCAAGAAGAA GCTTGAGTTG TTTCAAGCGA GAGCTAAGGA TATTGTTACT GTGTTGAAAG CTGAGATAGG AGGAACTGAA AATCAAGCGG TGGTTCAAGC CATACAGGAC CTGGAAGGGA CAACAGGAAC AACAACGGAG ACAACAAACA AGCCACAGCA CATGGAAGAA GTGCAGTTGC CAGACGAGGA ACACCCTGAA ACTGAACCCG AACCAGTGGG ACAAGGACAA GGACAAGGAC AAACACAAAC AGAAGCAGAG GCTATGCAAG AAGCTCTGTT CTAA 
Length1014
Protein Sequence
Protein Residue
Map Locationscaffold_1: 24250483.. 24252954
Download Sequence
A.thaliana
AGI-codeAT1G48620.1
Descriptionhigh mobility group A5
TAIR curator summaryThis gene is predicted to encodes a histone H1/H5 family member. A plant line expressing an RNAi construct targeted against HON5 shows a reduced level of agrobacterium-mediated root transformation.
Alias[HON5][high mobility group A5]
Gene coexpression
MR
MR Locus Description
48.4871 Ahg479634 F-box and associated interaction domains-containing protein
70.9366 Ahg944327 zinc finger (C2H2 type) family protein
88.0114 Ahg938233 plastocyanin-like domain-containing protein
94.8262 Ahg348712
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression