Detail



ID : Ahg914130

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|914130|Al_scaffold_0001_4384
Sequence
GATGCTTTTA AGCCTGAAAT ATATGGTGAT ACTCTGATTA TTGAACGCAG GATATCTGAT TCTACTAGTT TAACGGTTCT CAAGGATCAT CAAGGAAGAA AAATATCAAG CCGAAGAGAG GAGCTACGGC AACTTGTTGA ACATTATAAT ATTGATGTTG AGAATCCCTG TGTGATAATG AGTCAAGACA AGAGCAGGGA GTTCTTACAT TCTGGAAACG ACAAAGACAA ATTCAAGTTC TTTTATAAAG CAACCCTTCT TCAGCAAGTC GATGATCTTC TTCAAAGTAT TGGCATTAAG TTGAAATCTG CAAATGCTCT TATGGATGAG ATGGAGAAGA CCATAAAACC AATAGAAAAG GAGATCAGTG AATTGCTTGA AAAGATAAAG AATATGGAAC ATGTTGAAGA AATAACTCAA CAGGTTCTGC ATCTGAAAAA TAAGCTAGCT TGGTCATGGC TCATGGGTAT ATGA 
Length474
Protein Sequence
Protein Residue
Map Locationscaffold_1: 24994081.. 24994936
Download Sequence
A.thaliana
AGI-codeAT5G07660.1
Descriptionstructural maintenance of chromosomes 6A
TAIR curator summaryEncodes SMC6A (STRUCTURAL MAINTENANCE OF CHROMOSOMES 6A), a component of the SMC5/6 complex. SMC5/6 complex promotes sister chromatid alignment and homologous recombination after DNA damage.
Alias[SMC6A][structural maintenance of chromosomes 6A]
Gene coexpression
MR
MR Locus Description
4.3589 Virus0615
7.48331 Virus0379
7.48331 Ahg891917
12.0416 Virus3439
14.0712 Virus0715
14.4914 Ahg952447
14.9666 Ahg924124 cytochrome P450, family 708, subfamily A, polypeptide 1
16.1555 Virus0906
16.2481 Ahg936269 Terpenoid cyclases/Protein prenyltransferases superfamily protein
16.9115 Ahg495338 Copper transport protein family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression