Detail



ID : Ahg914801

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|914801|Al_scaffold_0001_5055
Sequence
ATGGAGTCGA TAACGTTAGA TATAGAGCTG TTGCAGTTGC CGGAGACATC GCCAATGTCG ATGAAATCTA ATCAAGATTT TGTTAAGAAG CTCTTTGATC AATGGCTTGC TCTTCCTGAA ACCAATCGAT TGGTCACATC TTTGGTAAAT GATGCAAAGG CAGGAGTGGC TCTGAATGTT ATGTGTGGAG GAGGCTCTTC GGGTACAAAT TCAGGGTCGA ATAGTCCATT GGCTTCGATG TTTCCAGCAC GGAATGGGCC TCCTCTTTCT CCAAGGAACT CAACTGGTTC GCCTCGGATC ACAAGACAAA GGACTGGTCT TTCCAATCTT AGTTCTCCTC TCAAAGTAGT TTCTGATCAT GTTAAAGAAC TCATTCCTCA GTTTTACTTC GAAGATGGTC GGCCACCACC AAATGATCTA AAAGAGCAGT GTATAGCTAA GATCAACAGT CTTTTTTATG GCCATGAGGA TGGTTTGCAA CTGCAAGAAT TTAAATTGGT CACTACTGAG ATCTGCAAGG TTCCATCATT TTTTTCCACC ACCATTTTCA AGAAAGTTGA TACCAATAAC ACTGGTTTTG TGAAAAGAGA AGACTTCATT GATTATTGGG TTAAGGGAAA TATGTTGACA AAGGAGATAA CAAGTCAGAT ATTTACAATA CTTAAGCAAC CAGATCACAA GTACCTTGTC CAGGATGATT TCAAGCCTGT GCTCCAAGAA CTATTAGCAA CACACCCTGG TCTTGAATTC TTGCAAGGAA CACCTGAGTT TCAGGATAGA TATGCTGAAA CTGTAATATA CAGAATCTAT TACTATATAA ATAGGAGTGG GAATGGGCAT CTTACATTGA GAGAGCTTAA GAGAGGAAAT TTAGTTGATG CAATGCAGCA TGCCGATGAA GAAGAGGACA TCAATAAAGT GTTGAGGTAC TTCTCGTATG AACATTTTTA TGTCATATAC TGCAAGTTCT GGGAGCTGGA TACAGATCAT GATTTCTTGA TCGACAAAGA GAATCTCATC CGATATAGTA ATCATGCCCT CACCTACAGG ATTGTCGACC GAATCTTTTC TCAGGTACCA AGGAAGTTTA CTAGTAAAAG CGAAGGAAAG ATGGGTTATG AGGATTTTGT TTACTTTATA TTAGCTGAAG AAGATAAGTC ATCAGAACCT AGTCTTGAGT ATTGGTTCAA GTGCATAGAT TTGGATGCAA ATGGAGTTTT GACGCGGAAC GAGCTACAAT TCTTTTACGA GGAGCAGCTG CATAGAATGG AATGCATGGC GCAAGAGGCT GTGCTGTTTG AGGATATTCT GTGCCAATTA TTCGACATGG TCAAACCAGA GGACGAAGGG TTCATTTGTC TAAATGATTT GAAGGGTTCT AAACTTTCTG GAAATGTCTT TAACATACTT TTCAACCTCA ACAAGTTTAT GGCGTTTGAA ACTCGCGATC CCTTCCTCAT TCGTCAGGAG CGGGCAAATC CGACATGGAC AGAGTGGGAT CGTTTTGCTC ATAGAGAATA TATTAGGCTA TCAATGGAAG AAGATGTCGA AGATGCTTCT AATGGAAGTG CTGAAGCATG GGACGACTCA CTTGAGGTTC CCTTTTGA 
Length1608
Protein Sequence
Protein Residue
Map Locationscaffold_1: 29042589.. 29045649
Download Sequence
A.thaliana
AGI-codeAT1G54450.1
DescriptionCalcium-binding EF-hand family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
21.0476 Ahg486726 VANGUARD 1 homolog 2
29.7489 Ahg497040 Adenine nucleotide alpha hydrolases-like superfamily protein
33.4066 Ahg478955 Serine/threonine-protein kinase WNK (With No Lysine)-related
34.7563 Ahg495057 conserved peptide upstream open reading frame 36
41.3521 Ahg930374
41.7612 Ahg935904 Curculin-like (mannose-binding) lectin family protein
48.6826 Ahg487747 laccase 14
51.3323 Ahg916260
56.3738 Ahg948117
57.2713 Ahg341194 Homeodomain-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression