| Annotation |
|---|
| Description | jgi|Araly1|495057|fgenesh2_kg.8__873__AT5G50011.1 |
| Sequence |
CAAAGCAATA ACATGCGGTG GTGGTTGAGT CTTTCTGCTT ATGTTTTTCG TACACTAGTC TTCTGTCGTG TGATTCTGTA AACTGAGATC TTGCTTTAGA CACAGCTCTT TTTCTTTGTG TGTGTAATGG GGTGGTCTTC TTTTTTCTTC ACAGTCCATT GCTTTGTCCG CCAAATTATT TGAGATACTC TTTTGGATAC TCTGTTTTGG TAAGGAATCA GTTGGTGAGA AAGTAGTTAT GGTTTGTCAA TCAGCGGGAC AGACAAGATT TCGAACACTC AAACACGAAC ACGGTATCTC AGGAAACATA GTAGTTAGAG TCATTGCATG CTTTCAACCT CTCCAAGATT GCCAGGCTGA ATATTTTCGT CAATTGTTGA AGCCCGTCAC GTAGAGTAGC TGGATATTTC TCCTTCTTAT TTCAAGCCTT AGTTTCTTTT TTTATTCATT TATTGATTTG TTTAGTGTTG GATGGGACAA GATCGTGGTT TGTGGTTTCC TAGTCAGCGG TTGAGCTCAT TGACTTCCCT ACCTCTGTCT CATCTCGGGA ATCAAGACTT GAATCCATGC GGCGACATGT TTTCTACTCG TGGATCTTAT CAAGTTTCTA CTCAATCCTA TTTTGATGGC TCTTATGGTT GGGTTCATGG ACCATCCCAC TTGCAGCAGC AGTTCTTGCC TCCTCTAAAT AAATGTATGA AGCATGTACC TCTTAAAGTA GACGGTTTTA TATCTAAAGC TGATGGCGGT CAATGTAGTC AGAAGAGGTT CCTTGTGTTT GATCAGTCTG GTGATCCGAC GACTCTGCTT GTTACTTCCG ATATCCGGAA ATCTTTTGAG ACCCTGAAAC AGCCTGTCTG TCCTGATATG AAGGAAGAAA TCCAAAGAAG CAACAAAGAT TTGTTTGTTT GTCAAGGAAT GCATGGAAAT AGCGAACCGG ATTTGAAGGA GGATACGGAA GAACTAAATG CTCTGCTTTA CTCGGAAGGT GAGAGTGATT ATTGTTCTGA AGAAGATGAG GTTACAAGCT CAGACCATTC CCCAAGCATT GTAGTATCAG CCCATGAGGG CCAAAAAGCA TTTCTTGGAA GCTATGGACA ATCATTAAAT GCTAAAAAGA GAAAGACACT CGAAACCTCG AATGAGAATA TGCGGGACGC TGAATCGAGC TGTGGTAGTT GTGACAATGA CAACACAGGG ATTAGTTTCT TAAAACGTTC AAAGACGTCT AGCAAGAAGA TAGGAGAAGA GAAGATATTT GAGACTGTAA GCCTTTTGCG CAGTATAGTC CCCGGGGAGG AACTGGCGGA CCCGATCTTA GTCATCGATA GAGCCATTGA TTACCTGAAA TCATTGAAGA TGGAAGTCAA AAATCGAGGA CATGGGACTC TTTGTTTGCA TGATATCTAA GAGTGGACTT GTTTTCTAAA CAAAGTAGTA GACATATTGG ACCATGGTAC TCTTGTCAAG CTACAAAGGG GAGTTGCGAG AGAAGGAATC GGATTAATAT GCAAATTGAA TATTTGTTGA TGATTAAGCT GGATTGATAA ATTTTTATTT TAGTCGTTTA GCTGTTTGTT ATATCATGTA |
| Length | 1590 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 12879502.. 12881425 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G50012.1 |
| Description | conserved peptide upstream open reading frame 36 |
| TAIR curator summary | Upstream open reading frames (uORFs) are small open reading frames found in the 5' UTR of a mature mRNA, and can potentially mediate translational regulation of the largest, or major, ORF (mORF). CPuORF36 represents a conserved upstream opening reading frame relative to major ORF AT5G50010.1 |
| Alias | [CPuORF36][conserved peptide upstream open reading frame 36] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 20.6882 |
Ahg313341 | general regulatory factor 12 |
| 34.7563 |
Ahg914801 | Calcium-binding EF-hand family protein |
| 35.0999 |
Ahg947612 | |
| 36.4692 |
Ahg904610 | Plant protein of unknown function (DUF946) |
| 65.7495 |
Ahg942435 | Galactose oxidase/kelch repeat superfamily protein |
| 77.4984 |
Ahg949601 | nuclear factor Y, subunit C8 |
| 84.6758 |
Ahg481064 | elicitor peptide 6 precursor |
| 89.0955 |
Ahg926146 | PLANT CADMIUM RESISTANCE 11 |
| 98.5292 |
Ahg916260 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|