Detail



ID : Ahg914947

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|914947|Al_scaffold_0001_5201
Sequence
ATGGCTACTT CTCCTTCTTC GTCTCGCACC TGGGAGTACA ATGTCTTCAC GAGCTTCCAT GGACCAGACG TCCGCAAGAC ATTTCTCAGT CATTTACGCA ACCAGTTTAA CCAAAATGGT ATCACAATGT TCGATGACAA CGGGATCCCG AGAAGCGAAA ATATACCATC TGCTCTCATA CAAGGGATTA GAGAATCAAG GATCTCGATC ATAGTGCTCT CGAAGATGTA TGCTTCGTCC AGGTGGTGTT TGGATGAGCT ATTAGAGATT TTGAAGTGCA AAGAAGATAT AGGTAAAATA GTGATGACCG TCTTCTACGG AGTAGATCCA TCTGATGTGC GGAACCAAAC TGGAGATTTC GGGATCGCTT TCAATAAAAC TTGTGCTCGA AAAACAAAGG AGCATGGGAG AAAATGGAGC GAAGCTTTGG ACTATGTGGG CAACATAGCC GGAGAACACA ACTGGGGCAA TGAAGCAGAA ATGATCGCGA AGATTGCAAG AGATGTTTCA GATAGATTGA ACGCCACACT GTCTAGGGAT TTTGATGGCA TGGTTGGACT TGAAACTCAT TTGAGAGAAA TGGAGTCTTT GCTTAATTTT GATTATGTTG GAGTTAAAAT TGTTGGGTTA GCTGGTCCTG CAGGTATTGG TAAGAGCACC ATTGCCAGAG CTTTATGTAG TGGACTCTCT AACAGGTTTC AACGTACTTG TTTTATGGAC AACCTTATGG AAAACTGTAA GATTGGTCTT GGTGAGTATA GTTTGAAGTT GCACTTGCAA GAGCAGCTTC TTTCTAAGGT TCTGAATCTA AATGGCATTA GGATATCCCA TTTAAGAGTG ATACAAGAGA GGCTACACGA CAAGAGGATT CTTATCATTC TTGATGATGT TGAGAATCTA GTTCAACTAG AGGCTTTGGC TAATATCAGC TGGTTTGGTC CTGGAAGTAG GGTTATCGTG ACCACTGAAA ACAAAGAGAT TTTGCAGCAA CATGGTATCA ATGATATATA CCAAGTGGGT TTTCCATCAG AAAGCGAAGC TCTAACGATC TTCTGTCTAT CTGCTTTTAG GCAAACGTCT CCACCGGATG GGTTTATGAA GCTTACTTGT GAAGTTGTTA AGATTTGTGG TAATCTTCCA TTGGGTCTGC ATGTTTTGGG GTCTTCATTG CGGGGAAAGA GTCAAGCTGA TTGGATTGAT GAACTACCAA GGTTGAAAAT TTGTCTTGAT GGGAGAATTG AGAGCGTACT AAAAGTGGGT TATGAGAGTT TACATGAGAA AGACCAAGTT ATATTTCTCC TCATTGCAAT CTTCTTGAAT TATGCACATG TTGATCATGT GACATCCGTG CTGGCAAAAA CTAACTTGGA CGTTAGTCTT GGGTTGAAAA ACCTAGCGAA AAAATATCTC ATACAACGTG AAAGTAGTAT AGTCGTAATG CACCATTTGC TTCAAGTAAT GGCTACACAA GTCATTTCCA AACAAGAACG TTCCAAACGC CAGATTTTAG TCGATGCCAA TGAAATTTGT TTTGTTCTAG AAATGGCAGA AGGTAATGGA TCAATTATAG GTGTATCATT TGACGTAGCT GAGATCAATG AATTAAGAAT AAGCGCGACG GCTTTTGCAA AAATGTGCAA TCTTGCATTC CTAAAAGTAT ACAATGGGAA ACATACTGAA AAAACACAAC TGCACATTCC AAATGAGATG GAATTTCCAC GTCGCCTAAA GTTACTACAT TGGGAAGCAT ACCCAAAAAA GAGTCTACCT ATTGGATTTT GTCTAGAAAA TCTCGTCAAA TTCAACATGG CATTTAGCAA GCTCGAGAAG CTTTGGGAAG GAACTCAGCC GCTTGCAAAT CTCAAGGAGA TGAATCTCGC TGTGTCAACT CATTTGAAAG AACTTCCAGA TCTTTCAAAA GCTACAAATC TGGAAAGTTT GAATCTTAAT GGTTGCACTG CGTTGGTAGA GATTCCATCC TCAATTGTGA ATCTTCATAA ACTAAGTGAA TTAGGGATGA GTACTTGCGA AAGTCTAGAA GTCATTCCAA CTCTCATCAA CTTGGCATCT CTTGAAAGGA TCTGGATGTT TCAAAGCCTA CAACTTAAAA GATTTCCAGA TTCTCCTACC AACGTCAAGG AAATCGAGAT ATACGATACA GGGGTAGAAG AGTTGCCTGC ATCACTTAGG CATTGCACTC GCCTTACTAC TCTTGATATA TGTTCCAACA GAAATTTCAA GACCTTCTCA ACACATCTCC CTACGTGTAT ATCATGGATA AGCCTGAGTA ATAGTGGTAT TGAGAGGATT ACAGATTGCA TCAAAGGTCT TCATAATCTA CAATTCCTTA TTTTAACAGG CTGCAAAAAA CTCAAGTCAT TGCCGGAGCT CCCCGATTCG CTCGAATTAC TAAGGGCAGA AGATTGCGAG TCATTAGAGA GAGTAAGTGG CCCCTTAAAA ACTCCAACTG CAACGCTCAG ATTCACTAAT TGCATCAAAT TGGGTGGACA AGCAAGGCGA GCGATTATCA AAGGATCATT TGTTCGCGGA TGGGCTCTCT TACCCGGAGG AGAAATACCA GCAAAGTTCG ATCACCGAGT TAGAGGAAAT TCCTTAACAA TTCCTCATTC TACTTCCAAC AGATTTAAGG TGTGCGTCGT GATATCACCC AACGATCAAT ACGTAAAATT TATGGAGTTA GAATTATTAT GTCGTTGCAA AGTCATCGGC AACTCAGTAA ACTCCTCTGA CATGAAGTTC AACCTATTCA GAGTCTTTGA GTACAGGACA AAACATTTAT TGATATTTCA CTCTAGTTTG ACATTTATTG ACCCCTCCGA AGTGAGTAGA AAGATAGTGC TCGAATTCAG CAGCAGCAAC CAAGTTTTGT ACATTCTTGA ATGCGGTGTC CAGATCTTGA CGGAAGAAGA AGAAGATGTT GATAGTATAA CTAACGAGGA ATCTGATTCT GAATCTGGCG AAATGTCTGA CAAAGAAGAC GATGAAGAGA GTTACAAATC TCAATCTGGA GAAGCATCTG AAGAAAAGGA TGAGGGTATC AGTGATGATG ATAACCACAA ATCCTTATCA AGGAAGCGTA TGAGGATAAC CTCTGCTCCC ATAGCTGAAG TGCAGATTAA ATTTGTGGTA GATGGCGAAA CACCGAATTT AGCAGCTTGA 
Length3180
Protein Sequence
Protein Residue
Map Locationscaffold_1: 30736627.. 30742929
Download Sequence
A.thaliana
AGI-codeAT1G56540.1
DescriptionDisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
25.807 Ahg313743 PLATZ transcription factor family protein
28.4956 Ahg495160 FUMARASE 2
54.5619 Ahg925156
71.7774 Ahg340143
91.214 Ahg493993 CLP1-similar protein 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression