Detail



ID : Ahg495160

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495160|fgenesh2_kg.8__976__AT5G50950.2
Sequence
AATATAATGG ATGATGATTA TGAGAAAAAC TTACACGTTT AAGAGGCCCG AAGTTGCTAT CTAACAGTTG TAGCCATGGC CGCTTTGATA ATGCAGTTTG AAGGAGAGAA GAAAAACTTA TCCGAAGTTG CAGACGTAAC CCTCAAGCAA GATCAAGATG AACAACAACG TAGATCTTAT TCGACGTCGT TTAGGGAAGA GAGGGACACT TTCGGGCCGA TCCAAGTTCC TTCCGATAAA TTATGGGGAG CACAGACGCA GAGATCGCTT CAGAACTTCG AGATTGGTGG TGACCGTGAG CGAATGCCGG AACCAATCGT CCGAGCTTTT GGTGTCTTGA AGAAATGTGC TGCCAAGGTT AACATGGAGT ATGGTCTTGA TCCAATGATT GGGGAAGCTA TAATGGAAGC TGCACAAGAA GTAGCAGAAG GAAAGCTCAA TGATCATTTT CCTCTTGTTG TATGGCAAAC TGGTAGTGGC ACTCAGAGTA ATATGAATGC TAATGAGGTT ATTGCTAATA GAGCAGCTGA GATTCTTGGT CACAAACGTG GGGAAAAAAT TGTGCACCCA AATGACCATG TGAATAGATC ACAATCTTCT AATGACACTT TTCCGACTGT CATGCACATT GCAGTTGCAA CCGAGATTAC TTCAAGGCTG ATCCCTAGTT TGAAAAATTT GCATAGCTCT TTGGAGTCTA AGTCCTTCGA GTTCAAAGAC ATTGTGAAAA TTGGAAGAAC TCACACTCAA GATGCTACAC CTTTGACGCT AGGACAAGAA TTTGGCGGCT ATGCTACTCA AGTTAAGTAT GGACTTAGTA GAGTCGCATG TACTCTACCT CGCATCTATC AGCTTGCACA AGGTGGAACC GCTGTTGGGA CCGGATTAAA CACTAAGAAA GGGTTTGATG TAAAGATAGC TGCTGCAGTA GCCGAAGAAA CAAACTTGCC ATTCGTCACT GCAGAAAACA AGTTTGAAGC TTTGGCTGCA CACGATGCTT GTGTTGAAAC AAGTGGATCT CTTAATACAA TCGCCACATC GTTGATGAAA ATCGCTAATG ATATACGTTT TCTTGGAAGT GGTCCAAGAT GCGGTCTTGG TGAACTTTCT CTGCCTGAAA ATGAACCAGG AAGCAGTATC ATGCCTGGAA AGGTAAATCC TACACAGTGT GAGGCATTGA CTATGGTTTG TGCTCAAGCT ATGGGAAACC ATGTAGCTGT GACAATTGGT GGGTCAAATG GTCATTTTGA ATTGAATGTA TTCAAACCGG TGATCGCAAG CGCTCTGTTA CATTCCATTA GATTAATAGC AGATGCTTCA GCTTCATTTG ACAAAAACTG TGTGAGAGGC AGTGAGGCTA ACAGAGAGAG GATCTCAAAG CTATTGCATG AGTCCCTTAT GCTTGTGACA TCATTGAATC CTAAAATCGG CTATGACAAT GCTGCAGCAG TTGCCAAGAA AGCTCACAAA GAAGGATGCA CATTAAAGCA CGCAGCTATG AAGTTAGGTG TTCTTACTTC GGAAGAGTTT GATACTCTTG TTGTTCCTGA GAAGATGATT GGTCCCTCTG ATTAAATTAT AATGGAGCCA AAAGCTTCAA ATACAAAGTG GATGTGTGGT TTTTTTTTTT GGATCAAGTT GTGTTTACTC TTTTGTAATA AAATGCTGCA TATGTATGCT TGTGTTCAAA TTTTTGGATA TGTTTTAGAG TCATGTGGTT ATAGTATTCT AAGTAATTTA TCAAAAAGTT TGTAATATAT ACTTAAGTTC AATGAAATAA ATTTGTATGT GAAAATGT 
Length1798
Protein Sequence
Protein Residue
Map Locationscaffold_8: 13420133.. 13423910
Download Sequence
A.thaliana
AGI-codeAT5G50950.1
DescriptionFUMARASE 2
TAIR curator summaryEncodes a fumarase enzyme initially shown to be in the mitochondria through proteomic studies but later shown to be present in the cytosol using an RFP fluorescent protein tag. It appears to be important for the accumulation of fumarate from malate in leaves in the light, and helps to promote nitrogen assimilation under high nitrogen conditions. It does not appear to be necessary for lipid metabolism and seedling growth.
Alias[FUM2][FUMARASE 2]
Gene coexpression
MR
MR Locus Description
28.4956 Ahg914947 Disease resistance protein (TIR-NBS-LRR class) family
51.264 Ahg331771 myb domain protein 49
51.264 Ahg357679 myb domain protein 49
65.7647 Ahg919963
94.361 Ahg926733
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression