Detail


ID : Ahg914996

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|914996|Al_scaffold_0001_5250
Sequence
ATGGTGATGA GAAAGCTTCA GCTAGAGCTA CCATTGAACC AGACGCAAAA GGTCAGGTTT AAGAGAGCTA TGGAGCGGCT ACAATTCTTA TCATCGACAA CAAACAACTC TGTTATCGTC GCCGACTCCA TTCACGAAGA TGCCTTCCTC CTTAAGGGAC ACGGAACTTC CGAGGTCGAT GGTGAGTTGA TGGCGACGGT CTGTGGAGTT GTGACTCACG TGGACAAGCT CGTCTATGTA CGCACCTTGC GAGCCAGGTA CAAGCCTGAG GTTAAAGATA TTGTGGTAGG ACGTGTCATC GAGGTCTCAA AAAGCTGTTG GAGATTGGAG CTCAACTCTA CTAAAGATGG AATTTTGAAG CTTTCTTCTA TGGATAATGA TGTTCAGAGG CGTAAAACGT ATGTGGATGA ACTCAATATG CGGAATATCA TTGTAGAAGA TGATGTCGTT TGTGCCGAAG TAGGATGTAT TCACCGCGAT GGCGGTTTGG AGCTACGAGC TACAAGTTAC AAATATGGCA AGCTTGAAAA GGGACAACAT CTGATGGTTG ATCCTTACTT GGTTAAGAGA AGCAACATTC ACTTTCATTA CATAGAAAGT CTTGGGATCG ATTTGATTAT CGGCCGCAAT GGCTTTATTT GGGTTGGGGA ACACGTCCAA GCACAAGATC ATATGATTTT GGATGATGAG ATGATCAAAC ATACTTCACT TGAGACTCGA CAAAGCATTC TCAGAATCGG GAATGCGATA CGAGTTTTGT CTAATCTAGG CTTCACCATG ACTCTAGAAG TGATTATGGA AACTTTTAAC TTAAGCAACG CTGAGAATAT TGACGTATAT GACATGCTTG GATCAGAGTT TCACGTTTTG GTCGCAGAGA ATGAACTTGA AAGAAGAATA AGACGTGCAT AG
Length912
Protein Sequence
Protein Residue
Map Locationscaffold_1: 31211111.. 31212454
Download Sequence
A.thaliana
AGI-codeAT1G03360.1
Descriptionribosomal RNA processing 4
TAIR curator summary
Alias[ATRRP4][RRP4][ribosomal RNA processing 4]
Gene coexpression
MR
MR Locus Description
4.3589 Ahg922858 ribosomal RNA processing 4
16.3095 Ahg359033 F-box associated ubiquitination effector family protein
28.4605 Ahg948315
33.1964 Ahg938949
46.7974 Ahg330628 alpha/beta-Hydrolases superfamily protein
64.0625 Ahg491825 low-molecular-weight cysteine-rich 27
66.4078 Ahg891201 Protein of unknown function (DUF1012)
69.4406 Ahg942385
89.7775 Ahg923832 downregulated in DIF1 11
96.7626 Ahg951254 EXORDIUM like 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression