Detail



ID : Ahg915611

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|915611|Al_scaffold_0008_362
Sequence
ATGGAGACTT CAAGAACGGT TGGGTATGAT GTATTCATCG ATTACAGTTC TAAGGATACA CGCCACTCCT TCGTCAGCCA CCTCCACGCC GCTTTCGGGC GGAGAGGTAT CTCGGTGTTC CTTGCAGAGC ACTGCACCCT CTCCGAGGCG ACACTGAAGC CCGGTTTCGA GTTAGCCAAC GAAATTCAGT TGGCGATTGA GAGATCTAAA ATATATGTGG TGGTTTTCTC CAAGAACTAC GCGTCCTCGC CTCTCTGCTT GGAAACTCTC ATGACGTTTA TGGATCTCCA ACGGCGTAAA GACGGCCCGG TGGTGATTCC GGTTTTTTAT GGTGACGTTA CTCGATCGAT CGTTGAGCAA CAGACAGAAA GATTCAAAGA GGATTTTTCC AAGCACCGTG GTTTTTTCTC CGATGAGAAA GACCGAGTAG AAAGATGGAG AAAGGGTCTG ACAGAAGCGG CCAAATTACA TGGCCATGAA TCAATTGAAC AACAAAATGA CTCGGAGTTA GTAGAAGATA TCGTTGCGGA TGTGCGGGAG AGGTTGTGTC CAACAGGTAT GATCGGGTTC TACTCGAGGT TGCTTGGGAT AGAAAACTTG CTTTTCAAGC AATCTCATGA CATATACCGA TTAGGGATTT GGGGTATGCC TGGCATTGGC AAGACAGCCA TTTCTCAAGA ATCCTTTAAC CAAATGACTA AGCACTTTGA AACTCAGTGC TTCATCCAAG ACTTCCACGT AGCGTTTAAT GATAAGGGAT TATACGTATT GCGGGAAGAA TATTTGATCG ACAAACTTAG AGAGAAAAGA GTTCTTGTTG TTCTTGATGA TGTGCGCAAT CCAATGGATG CTGAGTCTTT CCTAGGAGGA TTTGATCATT GTTTTGGTCC CGAAAGTTTA ATGATCATAT CATCCCGAGA TAAACAAGTT CTTCATCAGT GTCAGGTTGA TAGTGTTTAC GAGATACCGG CTTTAAACAA GAAGGAGGCT CAACGGTTAT TCACCCGGTT TGCATTTTCA GAAAAAGAAC CAAGTGATAC TAATCTTATA GAAGTGTCAA AGAAGGTCGT TGAGTATGCT GATGGAAATC CTTTAGCTCT CTGTCACTAT GGCAGAGAGC TGGGGAAGAA GAAACCGGAA GAAGTGGTGG CGGAATTCGA GAAGATTAAG CAATCTCCTC CGCGGGAGAT TATGCATGTG TTTAAGAGCA GCTATGATGA GCTCAGCGAA AATGAGAGGA GCATATTCTT AGACATTGCT TTTTTCTTTA ACGGTGAAAA CCTCGATTAT GTCATGCGTA TACTTGAAGG GTGTGGTTTC TTCCCACACG TTGGTATTGA CCGTCTTGTA GAACGGTCTT TATTGATGAT ATCAAAGAAC AACAATGTTG AGATGCAAAT TTTGATTCAG GATATTGCTC GGAATATCGT CAATGAAGAA AAAAATCAAA TCACAAGGCA TCGCAGATTG TGGGATCCTT CAATCATTAA ATCATTTCTA GAAGAAAATA AACCTAAGGG GACTGAAGTT ATTGAAGGAA TTTTTCTAGA CACAACAAAA TTAACCGTTG ATGTTAATCC TAAGGCCTTT GAGAATATGT ATAATCTTAG ACTATTGAAG ATCTACAGTT CAAACTCTGA AAGTACTCAA GAATTCCATC TTCCCAAGGG ACTCCGCTCT TTGCCTTATG AGCTCAGGCT ACTTCATTGG GAAAAGTATC CGTTGCGATC GTTTCCTGAA GACTTTGATC CTAGACACCT TGTTGAACTC AATATGCCTT ATAGTCATCT TCAGAATCTC TGGGAAGGAA CCAAGAGTTT GGTGAAGTTG AAGATAATAA ATCTTAGCCA TTCTCAGCAA CTAGTTGAAG TTGATGTACT TTTGAAAGCT TGTAGTCTTG AGCAAATCCA TCTTCAAGGT TGCACAAGCT TGGAGAGCAT CCCACACATT GATCAGCTAG AGAATCTTCA ACTTCTGAAT CTTTCTGGTT GCACGAGACT CAAACGTAAA GAGATTCTAG AGGAAATAAA AAAACTTGAT CCAGAAGGCG GGTTAAGAGA AACAAAATTT GAATCATTGG TGTTCTCCAC GTTAGTAGAG CTGGAACTTG AGGATAACAC CGAGAGCTTT TCATAA 
Length2136
Protein Sequence
Protein Residue
Map Locationscaffold_8: 2233141.. 2235881
Download Sequence
A.thaliana
AGI-codeAT5G45210.1
DescriptionDisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
39.6737 Ahg951821
43.2435 Ahg935572
53.7401 Ahg892054 lectin receptor kinase a4.1
59.8999 Ahg929021 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein
75.2064 Ahg479571 glycine-rich protein 5
77.8717 Ahg918583 Auxin efflux carrier family protein
83.1384 Ahg895204
84.8528 Ahg936672 Protein of unknown function (DUF1216)
85.4166 Ahg490882 Auxin-responsive GH3 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression