Detail



ID : Ahg915685

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|915685|Al_scaffold_0008_436
Sequence
ATGGCGGCTT CTTCCTCCTC CTCTTCCGAA ATACTTCCCA AGTCGTGGCA AGTGTTCATC AATTTCAGGG GAGCAGAATT GCGTGACAAT TTCATTAGCC ATCTGGAGGG AGCCTTAGCG CTAGCCGGGA TCAAATACTA TATCGACACG AAAGAGGTCC CGAGCGAAGA TCTTAGTGTC CTTTTCGAGA GGATCGAGCA ATCTGAAATT GCACTGTCGA TCTTCTCCAG CAAAGTAACA GAGTATTTGA ACGGGATCTC AAAAGCCTCA GGGGCAGAGA ATGTAGACAC ATTTTCTCTA GGCTCCTATG AGTTTCCATA TTCTTCCCTT GAAATATCAG TCACCGATGT TGACTATGGA ATGACTCCGC TTAAGCGCCA AGCCATGATT GACGAGTTAT GCAGAGTAGG AGGAGAACAT CTCAATGACA TCTCTACTTT GAGTTCAAAT GGTAATATTT CCTCTGGACA CATCGAACAG TCTCCACCCC ACTACGGAAT AGAACTGCGC CTTAAGGAAC TAGAAGGAAA GATACAATTT GATTGCGTAG AAACTATGAT TGTTGGAATT GTTGGGATGC CTGGGATTGG TAAAACCACT CTTGCGGAAA CATTGTATAG GAAGTGGGAA CACAAGTTTG AGAGGAGCAT GTTTTTCCCA GATGTCAGTA AGATGGCGAG TCAACCAGGA TTGCAGAAGA GATTATTGGA AGAGCTGTTG AAGGATATTC ATTACAAGAC AGGATATACA GAGAATGAAC ATGAGTTTTG TAAGGATGAT CTTCTCGAAA AGAAAGTTTT TGTTGTTATA GATGATGTTA GTAGCAAGGA ACAGCTCAAA TCTCTTTTTG GTCAATGTGA TTGGATCAAA AAAGGTAGCA AGATTGTTAT TACATCAAGT GATAAGTCAC TGCTCAAGGA ACTGGTTGAC GATACCTATG TAGTCCCAAG GTTGAACAGC AGAGACAGTT TACTGTGGTT TACCAATCAC GCCTTTGGTT TGGATGATGC CGAGGGAAAC TTCGTAAAGT TGTCCACACA CTTTCTGAAT TATGCCAAAG GCAACCCACT AGTCCTCAGA GCTTTTGGTG TAGAACTTCG TGGGAAAGAC GAGGCTTATT GGGAACAGAG GATTGGAACA CTGGCACAAA GCTCCAATAA GATGATCCAA TATGTCTTGA GAAAAAGATA TGATGAACTC ACAGAGAGGC AAAAAGATGC TTTTCTTGAC GTTGCATGTT TCTTCAAATC AGAGAATGTA AGTTATGTAC GATGCTTGGT AAATTCATGT GAATCTAAGT CTACTATGGT TTGGCATGAC ATAAGAGATC TCCAAGACAA GTTTCTCGTC AATATTTCTG GTGGTCGAGT TGAGATGCAT GATATAGTAT GTACATTCGC TAAGGAAATT GCTTCACAAG CATTGACCGA AGAAAATACA AAGGTTCATC TCATGCTCCG GAACTATCAA GATATCATTT GTTGGCTGAA GAATAAATTG GAAATGAAAA ATGTCAGAGG TATATTCTTA GACATGTCTG AAGTTCCGGA GGAAACGATA TTTGATTCTC ACATCTTTAG CAAAATGTGC AATCTTCGAT ATCTCAAAAT ATGCACTTCT GCCTGCCCTA AGCAAGGCGA AGGTATCTTC ACATTTGACA TCTATAAGGA AATTCGCTTA CCATTACATA AGGTACGGTA TCTCCACTGG ATGAAATATC CATGGGAGAA ACTGCCATCA GACTTCAACC CGAAGAATCT TGTTGATCTT GAACTGCCTT ATAGCTCCAT TAAGCAAGTT TGGGTGGGTG TAAAGGATAC CCCAAAACTA AAGTGGGCCA ATCTCAGCTA TTCAAGTAAG TTGACTAACC TTTTAGGGTT GTCAAATGCT AAAAATCTTG AAAGATTGAA TCTTGAAGGT TGCACAAGTC TGCTTAAACT GCCCCAAGAG ATGGAAAACA TGAAAAGTCT TGTCTTCCTG AATATGAGAC GTTGCACGAG TCTCACATTT CTTCAAAGAA TGAATATGAG TTCTCTGAAA ATTCTCATAC TCAGTGAACC ACATGGTACT CAGGGGGACG GCTTCCTCGG AAAATCTGGA AGCATTATAT TTAGATGGAA CTGCAATAAA GGGACTCCCT CCAGCCACCG GGGATCTGAT GAGACTTGCC ATCTTAAATA TGAAAGGATG TACAGAACTA GAGAGTCTTC CCAAACATCT TGGAAACCAG AAAGCTCTTG A 
Length2241
Protein Sequence
Protein Residue
Map Locationscaffold_8: 2654952.. 2657797
Download Sequence
A.thaliana
AGI-codeAT5G44870.1
DescriptionDisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summary
Alias[LAZ5][TTR1][LAZARUS 5][tolerance to Tobacco ringspot virus 1]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg933074
4.89898 Ahg345479
8.48528 Ahg933887 Transcription elongation factor (TFIIS) family protein
9.53939 Ahg897023
12 Ahg917326
14.5945 Ahg474556
14.8324 Ahg947274
16.8523 Virus0558
16.9411 Ahg493892
16.9706 Ahg941282
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression