Detail



ID : Ahg916132

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|916132|Al_scaffold_0008_883
Sequence
ATGCCTAAGC GAATATTTCG GATCATTAGT CTTAGTTCGT CTGCCAACCA TCTTTCAACC ATAAAGACAA ATGCAGATGG ATATGCAGCA ATGATAATGA AAGTGCTTGA CAAAGATAAT ATTGGATACA TCATGATGGG TAGTCTTAAA TCCTTGCTTC TGGAAGCTGA AACACATTCC ATCAGCACAA ACAGTGAAGA AAGAAAGAAG TTGGGCGACA TGATAAGTAA CAAGCTTAAG CCTACACTTG ACCCTAACCC GTTGAAGAGA TGGTACCATA AACTTAGATT CTTCGTACTG GATAACTGGC AAAGAATTTG GGTAATAGTG CTATGGCTCA TGATTATGGC CATCCTCTTC ATATACAAAT ATATTCAATA CAAGAATAGA GAAGTGTATG AAGTGTTGGG GCATTGTGTG TGCTTGGCTA AAGGTGCAGC TGAGACACTG AAGCTGAACA TGGCCTTGAT TCTGTTACCT GTATGCAGAA ATACCATTAC ATGGCTTAGA ACTAAAACTA GTTTGGGTGT TATTGTCCCT TTTGATGACA ACCTCAACTT TCATCAGGTT ATAGCGGTGG GAATCATGAT AGGAGTAGCC ATACACTCGG TGACCCACTT GGCGTGCGAT TTTCCACGGC TAATTGCGGC AACTCCAGAG GAATACATGC CTCTACGAAA ATTCTTTGGA GAAGAGCAAC CAAAGAGATA CTTGCATTTT GTGAAGTCAA CAGAAGGAAT AACAGGGCTC ATAATGGTTT TCTTGATGGC AATTGCTTTT ACACTAGCTA TCCCTTGGTT TAGACGAGGG AAGCTCGAAA AAAAGCTTCC AGAGCCACTA AAGAAACTAG CTAGCTTCAA TGCCTTCTGC AAAGAATGGT ACAAGAAAAC GACGTGGATG TACTTGGCAG TACCAGTAGC TTTCTATGCA TGTGAGAGAT TAATACGAGC ATTTAGGTCC AAAATGGAGA CGGTAAAAGT TATTAAGGCT GCGACTTATC CTGGAAACGT ATTGACATTG CACATGTCAA GGCCTACAAA CTTCGAATAC AAGAGCGGTC AATACATGTT TGTAAACTGT CCAGCAGTCT CACCGTTTGA GTGGCATCCA TTTTCAATAA CTTCTGCACC ACATGACGAG TATTTAAGTG TTCATATAAA ATCACTTGGA GATTGGACAA AGGCTATCAA AGGAGTTTTC TCCGAGGTAT CTATGCCACT TCCGGTCGGA GAGATGTCGC ATGGTGCAAA TAATTCCGAT TTCCCGAGAA TTATGATTGA TGGTCCGTAC GGCGCACCAG CACAAGACTA CAAGAAATAC GAGGTGGTTC TGCTGATCGG CCTTGGGATT GGAGCCACCC CAATGATAAG TATTATTAAG GACATAATCA ATAATACGGA GACCAAAGAA CTTTCTCAAG TTGACCTAGG GAAGGTGGGA TCACAACATG AGCCACAAGG TGAAAAAGAA ACTTTCAAGA CGCGAAGGGC TTACTTCTAC TGGGTAACAA GGGAGCAAGG CTCATATGAT TGGTTCAAGA ACATCATGAA CGAGATTGCT GAGCGGGACA AAAATAAAGT CATAGAACTA CACAACTATT GCACTAGCGT CTATGAAGAA GGAGACGTTC GTTCAGCGTT CATACATATG CTTCAGTCTC TAAACCATGC CAAGAGTGGT TTAGACATTG TCTCTGGGAC CAAGGTTATG TCCTACTTTG CCAAACCTAA TTGGGAAAAC ATTTACAAAC AGATAGCCAT GGATCACCCT GGCTCTAATG TTGGAGTGTT TTATTGTGGA GCCCCGGCAT TGACAAAGGA GTTAAGGAAT TTAGCTTTGG AATTCGCACA TAAGACAAGA ACTAGATTCT CCTTCCACAA AGAAAACTTT TAA 
Length1893
Protein Sequence
Protein Residue
Map Locationscaffold_8: 6223658.. 6230226
Download Sequence
A.thaliana
AGI-codeAT4G25090.1
DescriptionRiboflavin synthase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.16228 Ahg930597 F-box and associated interaction domains-containing protein
4.12311 Ahg922908 UBX domain-containing protein
4.58258 Ahg947107
5.2915 Ahg334057
5.83095 Ahg935409 LOB domain-containing protein 19
9.48683 Ahg923549
9.79796 Ahg937722
12.2474 Ahg324152 Iron/manganese superoxide dismutase family protein
16.9115 Ahg941694
16.9706 Ahg922987 Galactosyltransferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression