Detail



ID : Ahg916187

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|916187|Al_scaffold_0008_938
Sequence
ATGGCGGTCA ACTCCAATCA TCGCTTCCTC TCTTTTTCTT CGGTGCTCGT CGGTTTTGCA GTGAAACGCT TCTGTCTTCT TCTCTTCTTT GGATTCCCTT ATTTTCTTCA GCATCGGCAA CAAGTTAAGG CTCACATGGA CTCGCATTTT GGAGTAGAGA CTCCTGCGGA GAAGAAGTTA GAGGATGTAA TGCCCATTGC AACTGGACAT GAGAAGAGGA GCTTGAAGCT GAATTGGAGG GTTGAAGAGA GTAGTAATAC AGCGACGAAA AGGAAAGAAG GTGGTAGAGA TGTCGTAGTC GCTGAATCTG AGGAGCTTAG GATTGAAGAG AGTAGTAATA CGGAATTGAG AGGAGTGAAC TTGAGAAAGC CTTTGCAGCT GCTGGAAAGA TCCGGGAAAG TGGAAGAAGT TGGTGCTGAT GCTAAGATGG AGTTGTTCGG CCTTCACAAG ATCGCCACTG AAGGGTCATG TAGAGAGGCA CAGCCCATGG CCGTCATGGT CACTGCTCGT GCCAAATGGT ACCATACTTT TCGATGTTTC TACATTCCTT ACTCTGCAAC TCAGCTTTTG ATCTTTTAG 
Length579
Protein Sequence
Protein Residue
Map Locationscaffold_7: 19352870.. 19354255
Download Sequence
A.thaliana
AGI-codeAT4G24230.6
Descriptionacyl-CoA-binding domain 3
TAIR curator summaryacyl-CoA-binding protein ACBP3. Localized extracellularly in transiently expressed tobacco BY-2 cells and onion epidermal cells. Binds arachidonyl-CoA with high affinity.
Alias[ACBP3][acyl-CoA-binding domain 3]
Gene coexpression
MR
MR Locus Description
10.3923 Ahg483646 SPX domain gene 3
14 Ahg472566
15.8745 Ahg492432 acyl-CoA-binding domain 3
22.9129 Ahg910535 alpha/beta-Hydrolases superfamily protein
23.4947 Ahg920694 Pyridoxal phosphate phosphatase-related protein
25.4558 Ahg488984
30 Ahg478057 Protein of unknown function (DUF506)
31.1769 Ahg477631 ankyrin repeat family protein / regulator of chromosome condensation (RCC1) family protein
31.8434 Ahg493543 purple acid phosphatase 23
32.4654 Ahg488795 Eukaryotic aspartyl protease family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression