Detail



ID : Ahg916218

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|916218|Al_scaffold_0008_969
Sequence
ATGTGGAGGC TGAGACTTGG ACCGAAGGCC GGAGAAGATA CTCACTTGTT CACCACCAAC AACTATGCCG GGAGGCAGAT TTGGGAGTTC GATGCCAACG CAGGCTCTCC AGAGGAACTT GCCGAGGTAG AGGATGCTCG TCAGAATTTT TCAAACAACC GGTCACGTTT CAAGACCAGT GCAGATCTCC TATGGCGGAT GCAGTTTCTC AGGGAGAAGA AATTCGAGCA AAAGATTCCA CGAGTGATAG TAGAGGATGC GAGGAAAATA AAGTACGAAG ATGCAAAGAC CGCATTGAGA AGAGGGTTAC TCTATTTCAC AGCCTTGCAG GCTGATGATG GACACTGGCC AGCTGAAAAC TCTGGTCCAA ATTTCTACGC CCCACCTTTT TTGATATGCC TGTACATCAC TGGAAATCTG GAGAAAATCT TCACTCCCGA GCATGTTAAA GAGTTACTAC GTCACATCTA CAACATGCAG AACGAAGATG GTGGGTGGGG ATTACACGTA GAAAGCCACA GTGTTATGTT CTGTACAGTC ATCAACTACA TTTGTTTAAG AATTGTGGGC GAAGAAGCCA GTCATGATGA TCAAGGAAAT GGTTGTGCAA AGGCTCATAA GTGGATCATG GACCATGGTG GTGCTACCTA CACGCCCTTG ATAGGAAAAG CGTTACTATC GGTTCTTGGA GTGTATGATT GGTCTGGATG CAATCCTATA CCTCCAGAGT TCTGGTTGCT TCCGTCTTCT TTTCCTGTTA ATGGAGGTTG GACTCTCTGG ATTTATTTAC GGGATACTTT TATGGGGTTG TCATACTTGT ATGGTAAAAA ATTTGTGGCT GCCTCAACAC CTCTCATTCT CAAGCTCCGA GAAGAGCTTT ATCCGGAGCC TTATGCAAAA ATCAATTGGA CGCAAACACG AAACCGATGT GCAAAGGAAG ATCTCTACTA TCCACGCTCA TTTTTACAAG ATTTGTTTTG GAAAAGTGTT CACATGTTCT CGGAGAGTAT CCTAGATCGA TGGCCTTTAA ACAAACTAAT AAGAGAGAGA GCTCTTCGAT CCACTATGTC ACTCATTCAC TATCATGATG AATCCACCAG ATATATTACA GGCGGATGCC TGCCAAAGGC CTTTCATATG CTTGCATGTT GGATAGAAGA CCCTGAGAGT GATTATTTTA AAAAACATCT TGCTCGAGTT CGCGAATACA TATGGATTGG CGAGGATGGC CTGAAAATTC AGTCTTTTGG TAGCCAATTA TGGGATACAT CCTTATCGCT ACATGTCTTG TTAGACGGTA TTGATGAGCA TGATGTTGAT GAGATTAGAA CAACGCTCGT TAAAGGATAT GATTACTTGA AGAAATCTCA AATTACAGAG AACCCTCGCG GTGATCACTT CCAAATGTTT CGTCACATTA CAAAAGGTGG ATGGACGTTT TCAGATCAAG ATCAAGGATG GCCTGTTTCA GATTGTACTG CTGAAAGTTT AGAGTGTTGT CTATTCTTCG AGAGCTTGCC ATCAGAGCTA ATCGGGAAAA AAATGGATGT GGGGAAACTG TATGATGCTG TTGATTATCT TCTCTATCTG CAGAGTGATA ATGGAGGCAT AGCAGCATGG CAACCGGTTG ATGGGAAAGC CTGGTTAGAG TGGCTTAGTC CAGTGGAGTT TCTTGAAGAC GCGGTGGTCG AGTATGAGTA TGTAGAATGT ACGGGGTCAG CGATTGTCGC GTTGGCTAAG TTTACTAAAC AGTTTCCAGA GTATAAAAAC GCAGAGGTTA AACAGTTTAT AACAAAGGGT GCAAAGTACA TTGAAGACAT GCAAACGGTG GATGGTTCAT GGTACGGAAA TTGGGGAGTG TGTTTTATAT ATGGGACCTT CTTTGCGGTA AGAGGTCTTG TGGCTGCTGG GAAGACTTAC GGTAACTGTG AAGCAATTCG TAAAGCAGTT CGTTTTCTTC TCGACACACA AAATCTGGAG GGTGGATGGG GAGAGAGCTT TCTCTCTTGT CCAAGCAAGA TATACACTCC TTTGAAAGGA AACAGCACAA ATGTGGTGCA AACAGGACAA GCACTTATAG TGCTAATTAT GGCTGATCAA ATGGAGAGAG ATCCTTTACC GGTTCATCGC GCTGCCAAAG TGTTGATCAA TTCACAGTTG GATAATGGCG ATTTTCCACA ACAGGAAATA ATGGGAACGT TCATGAGAAC TGTGATGCTC CATTTTCCAA CCTATAGGAA CACGTTCTCT CTTTGGGCTC TCACACATTA CACACAGGCT CTGCGACGGC TTCTCCCTTA A 
Length2301
Protein Sequence
Protein Residue
Map Locationscaffold_8: 9925979.. 9933473
Download Sequence
A.thaliana
AGI-codeAT5G48010.2
Descriptionthalianol synthase 1
TAIR curator summaryEncodes an oxidosqualene cyclase involved in the biosynthesis of thalianol, a tricyclic triterpenoid of unknown function. Overexpression of THAS leads to dwarfing in the aerial tissues of Arabidopsis plants, but increases their root length. THAS is part of a small operon-like cluster of genes (with At5g48000 (THAH) and At5g47990 (THAD)) involved in thalianol metabolism.
Alias[AtTHAS1][THAS][THAS1][Arabidopsis thaliana thalianol synthase 1][THALIANOL SYNTHASE][thalianol synthase 1]
Gene coexpression
MR
MR Locus Description
22.7376 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
27.4955 Ahg936672 Protein of unknown function (DUF1216)
33.4664 Ahg337685 histone acetyltransferase of the CBP family 4
38.7298 Ahg907348
49.1528 Ahg944334
51.1175 Ahg351609 Protein of Unknown Function (DUF239)
57.9655 Ahg947946
61.1146 Ahg351608 Protein of Unknown Function (DUF239)
61.4817 Ahg890287 Protein of unknown function (DUF1264)
63.3877 Ahg947152
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression