| Annotation |
|---|
| Description | jgi|Araly1|916339|Al_scaffold_0008_1090 |
| Sequence |
ATGCGGTGCT TTCCACCGCA CTTCTGGTGC ACCTCCGTTG TCCTTTTCTT GTCGGTTACC GGAACCCTAG CCGCCGATCC TTACGTCTTC TTCGATTGGA CTGTCTCTTA CCTCTCTGCT TCTCCTTTCG GCACTCGTCA ACAGGTAATT GGGATAAATG GGCAATTTCC TGGTCCGATT CTAAACGTAA CTACGAATTG GAATGTTGTT ATGAATGTGA AGAATAATCT TGATGAGCCA TTGCTTCTTA CATGGAATGG GATACAACAT AGGAAAAATT CATGGCAAGA TGGTGTTTTG GGAACTAATT GTCCAATTCC TTCTGGTTGG AATTGGACTT ATGAGTTTCA AGTTAAAGAT CAGATTGGTA GTTTCTTTTA TTTTCCATCT ACAAATTTTC AGAGAGCTTC TGGTGGGTAT GGAGGGATTA TTATCAATAA TCGAGAAATC ATTCCGGTTC CATTTGCTCT TCCTGATGGT GATGTTACTC TCTTTATCAG TGATTGGTAT ACTAAGAGCC ATAAGAAGCT GAGGAAGGAT GTTGAGAGTA AGAAAGGCCT TGGACCTCCA GATGGTATTC TTATAAATGG ATTTGGACCT TTTCCTTACA CTCGTGAGCT AGCTTCGAAT AATTTTCCTT TTGGGACAAT AAACGTTGAA CCAGGACGAA CATATCGTTT TCGTGTTCAC AACAGTGGCA TTGCAACCAG CCTGAATTTC AGAATACAGA ATCATAACCT GCTTCTTGTT GAGACAGAAG GGTCATACAC AGTTCAGCAG AATTATACGA ATATGGACAT TCATGTGGGT CAATCTTTCT CATTTCTGGT CACTATGGAT CAGTCTGGTA GTAATGACTA CTACATTGTT GCCAGCCCAA GGTTTTCTAC ATCCATCAAA GCTAGTGGAG TCGCTGTCTT GCGCTACTCT AATTCCCAAG GACCCGCTTC AGGTCCACTC CCTGATCCTC CTATTGAGTT GGACACATTT TTCTCAATGA ACCAAGCACG ATCCTTAAGG TTGAATTTGT CAGCTGGAGC TGCCCGCCCA AACCCGCAGG GATCTTTCAA ATATGGCCAG ATTACAGTAA CTGATGTTTA TGTGATTGTC AACCGATCAC CAGAGATGAT AGAAGGGCGA TTGCGTGCCA CTCTTAATGG TATATCATAC TTACCTCCTT CAACACCCCT AAAGCTTGCT CAGCAATACA ACATCTCAGG GGTATACAAG TTGGATTTCC CCAAAAGACC GATGAATAGG CACCCCAGGG TTGATACCTC TGTCATAAAC GGCACGTTCA AGGGATTCGT GGAAATCATA TTTCAGAATA GTGACACCAC TGTTAAGAGC TACCACTTGG ATGGTTATGC ATTTTTTGTT GTTGGGATGG ACTTTGGTCT GTGGACAGAA AATAGCAGAA GCACATACAA CAAGGGGGAT GCAGTTGCTC GATCTACTAC GCAGGTGTTT CCTGGTTCAT GGACGGCCAT CTTGGTTTCT TTGGACAATG CTGGCATGTG GAACCTTCGA ATAGACAATC TCGCCTCATG GTATCTGGGC CAAGAACTAT ACTTGAGTGT GGTTAATCCA GAGATTGACA GTGACTCGTC TGAGAATTCC GTTCCTGACA ACACCATATA TTGTGGTCGG CTCTCACCAT TACAAAAGTA A |
| Length | 1671 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 11044505.. 11046880 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G48450.1 |
| Description | SKU5 similar 3 |
| TAIR curator summary | Encodes a protein with two DUF26 domains and a signal peptide for secretion. The protein is transported to the apoplast when it is expressed as a GFP fusion protein. |
| Alias | [sks3][SKU5 similar 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 31.0322 |
Ahg930445 | topoisomerase II |
| 46.5618 |
Ahg479286 | conserved peptide upstream open reading frame 30 |
| 58.9491 |
Ahg490338 | Plant invertase/pectin methylesterase inhibitor superfamily |
| 63.0476 |
Ahg491249 | Leucine-rich repeat protein kinase family protein |
| 67.3053 |
Ahg921665 | Eukaryotic aspartyl protease family protein |
| 74.162 |
Ahg933364 | expansin A6 |
| 80.8332 |
Ahg904107 | Leucine-rich repeat (LRR) family protein |
| 85.5921 |
Ahg493497 | xyloglucan endotransglucosylase/hydrolase 15 |
| 95.9375 |
Ahg487140 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| 97.2471 |
Ahg935472 | Plant-specific transcription factor YABBY family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|