Detail


ID : Ahg916456

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|916456|Al_scaffold_0008_1207
Sequence
ATGGGGTTAG GGCATCTTTT GGTTTATGTC GTGGTCCTAA GTGCCATTGC AGCTACAGTG ACATCGTACC CTTACTCATC TCCTCAAACA CCACAATACA ATTCTCCAAG CCATGAACAC AAATCACCAT ATCCACCTAA AAAGTATTCC CCATACTACT CAGCATCACC ACCACCTTCA CCACAATATC GAAGACAAGG CCCTAAGTAC ACGCCACATC CAACACCATA TCTCTACAGT TCCCCACCTC CTCCATACTA CTCTCCTTCT CCAAAGATTG AGTACAAGTC CCCACCACCA CCGTACGTTT ACAGCTCCCC ACCTCCTCCA TACTACTCTC CTTCTCCAAA GGTTGAGTAC AAGTCCCCAC CACCGCCGTA CGTCTACAGC TCCCCACCTC CTCCATACTA CTCTCCTTCT CCAAAGGTTG AGTACAAGTC CCCACCACCG CCGTACGTCT ACAGCTCTCC ACCTCCTCCA TACTACTCTC CTTCTCCAAA GGTGGAGTAC AAGTCCCCAC CACCGCCGTA CGTTTACAGC TCCCCACCTC CTCCATACTA CTCTCCTTCT CCAAAGGTTG AGTACAAGTC CCCACCACCA CCGTACGTCT ACAACTCCCC ACCTCCTCCA TACTACTCTC CTTCCCCTAA GGTCACTTAC AAATCTCCCC CACCACCGGT TAAAGACAAA CTCTCCTATG CCAAAAATGA TGTAGTGCGT CCTTATGGAA AGAACGAAAC TCTCAATCTC TCATCTCAAG GTTTACAATT TTATTACACA ATAATATAA
Length789
Protein Sequence
Protein Residue
Map Locationscaffold_8: 11868114.. 11871311
Download Sequence
A.thaliana
AGI-codeAT5G35190.1
Descriptionproline-rich extensin-like family protein
TAIR curator summary
Alias[EXT13][extensin 13]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg323992 hydroxyproline-rich glycoprotein
4 Ahg347223 Proline-rich extensin-like family protein
4.89898 Ahg355525 transposable element gene
4.89898 Ahg938381 Proline-rich extensin-like family protein
5.09902 Ahg945881 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
5.47723 Ahg931786 proline-rich extensin-like family protein
5.65685 Ahg912232 Proline-rich extensin-like family protein
6 Ahg344496 extensin proline-rich 1
8.12404 Ahg921634 Proline-rich extensin-like family protein
8.48528 Ahg905690
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression