Detail



ID : Ahg916651

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|916651|Al_scaffold_0008_1402
Sequence
ATGGTTACAT CCCATTCTAT GTATTTCGTT ATCATCACAA CATTGCTTTT CAGTGGGATT TTTGAATCTT GTAACACTAC GAAGCTCCAC GATGCCGAAG TGAGAGCATT GAAGGAGATA GGAAAGAAGA TGAAGAAAAA AGATTGGGAC TTTAGCAAAG ATCCATGCAG CGGAAAAGGG AATTGGATTG TAAACACTAA TCCACTTATA AATAGCAATC TCACTTGTGA TTGTTCTTTT CATCCTCCCA ACTCATCGTG TCACGTTATC GCAATGATCC TAACTCGTAA TTGTCTTACT GGTTCAATTC CAAAGGAATG GGCATCAATG CGTTTGGAAA AGCTGAACCT CGAAGGAAAC CGATTTTCAG GACCAATCCC TCCTGAGATT GGAAAGTTGG TTCATCTGGA AGAACTATTT CTATCTTCAA ATTCTTTTAC CGCCCATTTG CCAGAACAAC TCGGACAACT TAAAAACCTG ACTAATATGT GGATAAGTGA CAATGAATTT ACTGGACAAA TACCAAATTT TATAGGAAAC TTGACAAAGA TGGTTGAATT GGAGATGTTT GGTAGCGGTT TGGACGGTCC ATTACCTTCC AGTACTTCTG CTCTAACTAG CTTGGTCAAC CTCCAGATTA GCGATCTAGG AGGAAAATCG TCTTCCTTTC CTCCACTGCA GAATATGAAG TCTCTCAAAA TATTGGAGTT GAGGAGATGC AACATATACG GACGACTTCC TAAATATATT GGAGATATGA CGAGTCTCAA AACACTTGAC CTCAGTTTTA ACCACTTAAC GGACAAGATC CCGTCTTCAT TAGCCAACTT GAAGTTAGCA GATTATATTT ACTTGGCAGG AAACAAGTTC ACAGGGGGTG TTCCGAACAG TTTTATCGAA AGTAACAAAA ATATAGATAT ATCTTCCAAC AATTTCACCC TTCAAAGTTC AATTCCTCGT GGTGATTGTG ACCAAGTTAA TAATGCATAT AAGGGCTACC CTTGTTACTT CCAACACTTG CCTTGCCTTT TGCCTAAAAG AAAGTACAAA TATAAGCTGT ACATAAACTG TGGGGGAGAT GAAATAAAAG TTGATAAAGA AAAGACATAC GAAGCTAACA TAGAGGGCCA ACGACCTACT ACATTTGTCT ATGGCTCTGA CAAGCACTGG GCATTTAGTA GCACCGGACA CTTCATGAAT GATCTTACAG AAGTGGATGA CTACACCGTG TCTAACACCT CTACACTATT AGCCAATGCT TCTTCTCCAA GTTTCGTGCT TTACAAGACG GCTCGGATTT CTCCTCTCTT GTTGACTTAC TACGGACTCT GTCTGGGCAA TGGGGAGTAC ACTGTGAGTC TCCACTTCGC AGAGATAATA TTTACCAGCG ACAGTACATT CTACAGTCTT GGCAAACGAG TCTTCGATAT TTATGTTCAG GAGAAGTTGA TGATTAAAAA CTTCAACATT AAAGAAGCTG CTGGTGGATC GGGCAAGCCA ATCATAAAGA CATTTGTGGT AAATGTAACA AATCACATTC TGAAGATCAG CTTGAGGTGG GCTGGCAAAG GGACAACTAC GCTTCCAATT AGAGGAGTTT ATGGCCCAAT GATCTCAGCT ATATCAGTTG AACCTAATTT TAAATCTCCG GAGCATGATG ACAAGAAGAA TATCCTGCTA ATAGTAGGAA TTATAGTTGC CGCAGTAATC CTCATTTTGG CCATCATCAC AGTGATCATT TGCTTGTGGA GAAGAAGGTG TTACAAAAAT GCAATGGACA AAGAGCTTAG GGGTTTAGAT CTTCAGACTG AAACTTTTAC TCTTCGACAT ATAAAAGCAG CTACTAATAA CTTTGATGCA GCAAACAAGA TTGGTGAAGG TGGATTTGGC TCTGTTTACA AGGGTGTGTT ATCAGAGGGG AGGATGATTG CGGTTAAAAA ATTGTCTTCA AAGTCCAATC AAGGAAGCCG GGAGTTTGTG AATGAGTTAG GCATGATCTC ATCTCTACAA CATCCAAATC TTGTGAAGCT ATATGGATCT TGTGTGGAGA AGAAGCAACT GATATTGGTC TACGAGTATT TGGAGAACAA CTGTCTTTCT CGTGCTCTAT TTGGATCCAG ACTGAAATTA GAATGGCCAA CGAGGAAGAA GATTTGTTTG GGCATAGCTA AAGGACTAAA ATTTCTCCAC GAAGAATCTG CGATCAAGAT TGTGCACAGG GATATAAAGG CGAGCAACGT GTTGCTAGAT GACGATCTCA ACGCCAAAAT CTCTGACTTT GGTTTGGCAA AGCTGAATGA TGATGAGAAC ACACACATCA ATACTCGTAT CGCCGGAACA CCAGGATATA TGGCTCCGGA ATACGCCATG CGTGGTTATT TGACTGAAAA AGCTGATGTT TATAGCTTTG GCGTCGTTGC CCTTGAAATT GTCAGTGGAA AGAGTAACTC AAACGTCAAA CCAAGCGAGA ACTTGGAGTG CCTTCTTGAT CAGGCCTACG TTTTGCAAGA CAAGGGATGC TTACTAGACT TGGTTGATCC AGTGCTAGAT TCAGCCTACT CAAAAGAGGA AGCAATGGTG ATCTTGAACG TGGCACTATT GTGCACTAAC ACGTCCCCGG CGTTAAGGCC AAAAATGTCG CAGGTCGTGA GTCTCCTCGA GGAAAAGGCC GCAATGAAAA ACCTGTTGTC GGACCCAAAC TTCTCAGCAG TGAACCCGAA GCTGAAGGAT TTAAGGAAAT TCTTTTGGCA GAGTGAAGCC TCCACAAGTG GGCCTCGTAC CACTGACAAT GTTGATGCTG ACGAGAACTC ATCAAAAGAT GAAATAGTAG AAGTACCAGA ACTTGAATGT GAGTAA 
Length2856
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16469481.. 16475332
Download Sequence
A.thaliana
AGI-codeAT1G07650.2
DescriptionLeucine-rich repeat transmembrane protein kinase
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.6619 Ahg931163
17.2047 Ahg939262
20.4206 Ahg908543 TRAF-like family protein
23.4521 Virus1029
27.5681 Ahg924509
31.8591 Ahg472431 RING/U-box superfamily protein
33.3167 Ahg893712
35.242 Ahg902495 Galactose oxidase/kelch repeat superfamily protein
36.9865 Ahg322734 Adenine nucleotide alpha hydrolases-like superfamily protein
43.795 Ahg488616 Glycosyl hydrolase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression