Detail


ID : Ahg916864

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|916864|Al_scaffold_0008_1615
Sequence
ATGGCAGAGA CTGATGTGGA TGATGATTAT GATGGCCTTA AACCTTCTGA ATTATTTGGG AAACATACAT GGAAGATTGA GAAATTTTCA CAAGTCGGCA AAAGGGAGTT CCGTAGCAAT TGGTTTGAAG CTGGCGGATA CAATTGGTAT ATTTTAATTT ATCCAGAAGG ATGTGATGTT AGCAATTATC TCTCATTATT TCTCTGTGTT GCAAACTATG ATAAACTTCT TCCAGGCTGG AGTCAGTTCG CTCAGTTTAC TATATCTGTG GTGCATAAAG ATCCAAAGAA GTCTAAGTCT GCAGATACGT TGCACCGGTT TTGGAAGAAA GAACATGATT GGGGATGGAA AAAGTTTATG GAGTTACCCA AGTTACATGA TGGGTTCATA GATGATTTTG GCTCTCTTAC AATTGAGGCT CATGTTCAGG TGATCAGAGA CAGGGTGGAC CGACCTTTTC GCTGCCTTAA TTATGATTAC AAGAAAGAGC TTGTTAGGGT GTATTTGCCA AATGTAGAGC AAATTTTCCG ACGTTTTGTG GAGGAGAGAA GAAGCAAGCT TGAGAAGTTG AAAGAGGACA AGGCCAAATG GACAGGCTTT GGTGATTTCT GGTTAGGGAT GGACCAAAAC TCTAGGCAAC GGATGTCTAG AGAGAAAATG GACGAAATCC TAAAAGGAGT TGTAAAACAC TTTTTCAAAG AAAAGGAAGT TTCATCTCCT GTGGTGATGG ATTTCTTGTA TAGTGGGTTG AAGGATCTTG AAGGCCAAAC TAAGAACAAG AAAGCTAGCC CAAGACTGTT AGATGCCAAG GAATTGCCAG CTCCGTTGGT TAACGTGGAC AAAGATATGT TCCTATTAGT TGATGATGAT GTGCTGTTAC TCCTACAGAG AGCTGCTCTA GAGCCATTGC CTCCAAAAGA TGAGAATGGT CCTCAAAATC GTATTAAGGA TGGCAATGAT GGAGAAGAGG TCAACATGGA AGCTTATGAG CGTGATGAGA TACGTTTAAC TGAGTTGGGT AAACGAACTG TGGAGATATT TGTTCTTGAC CATATCTTTA GCAGCAAAAT TGAGGTTGCA TATCAAGAAG CTATTGTGCT AAAAAGGCAG GAAGAACTTA TTCGTGAGGA AGAGGAAGAA GCGTCGAAAC GGAGCAAAGG GCTGAAAAAA GGTTTTGGGA AATGTAGACT GAATTAA
Length1197
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14173953.. 14176181
Download Sequence
A.thaliana
AGI-codeAT5G52330.1
DescriptionTRAF-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
23.4307 Ahg474716 dehydrin family protein
36.1663 Ahg489834 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
42.638 Ahg495677 Nucleotide/sugar transporter family protein
50.0999 Ahg480346 CBS domain-containing protein with a domain of unknown function (DUF21)
50.4678 Ahg470961 Major facilitator superfamily protein
52.7636 Ahg315131 beta vacuolar processing enzyme
61.1964 Ahg494274 Protein of unknown function (DUF581)
62.1289 Ahg475488 Major facilitator superfamily protein
63.2139 Ahg495838 Fibronectin type III domain-containing protein
66.7083 Ahg923842
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression