Detail



ID : Ahg917162

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|917162|Al_scaffold_0008_1913
Sequence
ATGTTGTTCC GGTCTGTTCA TATTGTGGCT AGGTTCAGCA ACTCCACGAG CACTTCGGTT GCTCGATTTT TCTATTCTCC TTCCCTTCTT CGTCGTGGTT GGTCTTTTAG AGCTTCTTTT ATATCTCGTT GTTGTTCTTC TGTGTGCGTT CGGTCTGATA TTGATGTGGC TCGAGACTCG GTGGTGAAGA TCTTTTCCTT TTCTAGAGAG CCAAATGTTG TTCAACCTTG GCAAACAACT GAGAAAGAAT ACTCAAGCTC TGGATTTGTA ATATCCGGAA GGAGGATTCT TACAAACTCT CATGTTGCGG GTGATCACCC ATACGTGCAA GTGAGAAAGC ATGGTTCATC CACTAAGTAC AAAGCAGAAG TTAAAGCGCA TGGATATGGA TGTGACTTAG CTATTTTAAG CATTAATAGT GAAGAGTTTT GGGAGGATAT GAATCCTTTG GAGCTCGGAG ACATACCTTT TATTGGTGAA ACTGTCTACG CTTTAGGTTA TCCTCGTGGT GGTGATAGCA TATCGGTCAC AAAAGGTATT GTAACGAGAG TTGAACCTCA AACGTATTCT CACAGCTCCA TTGGAATATT AACGATACAA ACAGATGCGG CTATTAACGA TGGAAATAAT GGTGGTCCGG TGGTCATGGA CAACAAAGTT GCTGGTGTGG TATATGAAAA TCGTTCATCT TGTGACGACT ATATAATACC AACTCCAATA ATTAAGCATT TTTTAACTGC TGTTGAAGAA ACCGGTCAAT ACATTGGTTT ATGTTCTCTG GATATATCAT ATCAATCTAT GGAGAATGAT TATATACGTA AACACTTCAA AATGAGTACT GAAATGACAG GAGTTCTTAT AAACGAAATA AATCTGCTGT CAAGTGCTCA AGGAATTCTG AAAAAAGATG ATGTCATTCT AGCAATTGAT GGTGTTCCTA TTGGAAATGA TGAGACAATT CCTTTTCGGA AAAAAGAAAG GATCAATTTC GAACATTTGG TTACTATAAA GAAATCAGGT GAAACAGTCT TACTTAAAGT CTTAAGAAAG GGAAAAGAAC ACGAGTTCAA TATCATTGTA AGACATGATC AGCCGCTGGT TCCGGACCGA CATCTTCCAA GTTATTACAT ACTTGCGGGT TTTGTCTTTG TGCCTCTCAC TAAGCCATAC ATTAGTAAAT CTTGTAAAAT ATGTGAATGT TCATCAAACA GAAAGGCCAA AAAGGCTGGT GAACAGATTG TTATAATTTC ACAGGTCTTA TTGAATGACA TAACCACAGG ATATCGTGAT TTCAAAGATT TGCAGGTGAA GAATGTGAAC GGAGTGGAAG TGTTGAATCT CAGACACCTA AGTGAGCTCA TTGAGAAGTG TTGTGAAGAA GATTTGAGGT TGGATTTAGA AAACGGACGA GTTATTTCCT TGAACTATAC ATCTGCAAAA GAAGCTACTT CTTGGATCTT GGAACATCAC GGAATACCAT CGGCCATGTC CAAGGATCTT AAGATAGAAT CCAGTCAATT AGGTTCCTCA GAAGCTGCTT TGACAACCCA ATAA 
Length1554
Protein Sequence
Protein Residue
Map Locationscaffold_8: 15717812.. 15720097
Download Sequence
A.thaliana
AGI-codeAT1G51150.1
DescriptionDegP protease 6
TAIR curator summaryEncodes a putative DegP protease.
Alias[DEG6][DegP6][degradation of periplasmic proteins 6][DegP protease 6]
Gene coexpression
MR
MR Locus Description
3.87298 Ahg926310
5.83095 Ahg946513
10.9087 Ahg930067 F-box and associated interaction domains-containing protein
13.1149 Ahg907259
18.7083 Ahg913089 Cytochrome c oxidase, subunit Vib family protein
23.2379 Ahg313537 low-molecular-weight cysteine-rich 31
30 Ahg353497 Plant invertase/pectin methylesterase inhibitor superfamily
31.1929 Ahg946201 Glycosyl hydrolase family protein with chitinase insertion domain
31.4643 Ahg331717
35.1426 Ahg314037 ubiquitin-conjugating enzyme 31
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression